NAMESPACE

# Generated by roxygen2: do not edit by hand

export(ENIGMA_L2_max_norm)
export(ENIGMA_trace_norm)
export(FindCSE_DEG)
export(batch_correct)
export(cell_deconvolve_trace)
export(clean_model)
export(create_ENIGMA)
export(get_cell_proportion)
export(plotLossCurve)
export(plot_proportion)
export(sce2array)
exportClasses(ENIGMA)
import(ggplot2)
importClassesFrom(Matrix,dgCMatrix)
importFrom(MASS,rlm)
importFrom(S4Vectors,DataFrame)
importFrom(SingleCellExperiment,SingleCellExperiment)
importFrom(SingleCellExperiment,colData)
importFrom(SummarizedExperiment,SummarizedExperiment)
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,colData)
importFrom(e1071,svm)
importFrom(magrittr,"%>%")
importFrom(methods,new)
importFrom(methods,setClass)
importFrom(methods,setClassUnion)
importFrom(nnls,nnls)
importFrom(plyr,alply)
importFrom(purrr,map2_df)
importFrom(reshape2,melt)
importFrom(sva,ComBat)
importFrom(tidyr,separate)