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I saw your organization s projects on GitHub. As an experienced blockchain and work full-stack developer, I am looking for projects where I can leverage my expertise in decentralized applications, smart ...
  • kentaurse
  • Opened 
    on Jun 26, 2024
  • #36

The resource blocks for rules were developed for a S/UGE cluster profile for a particular HPC. These are not going to be generalizable out of the box. The following issues come immediately to mind: ...
documentation
enhancement
help wanted
testing
  • lightning-auriga
  • Opened 
    on Jan 16, 2024
  • #13

The existing lftp call pulls everything from the GA4GH region set. This isn t ideal, as there are tons of files in those directories, and for things like for example CI, that s a bunch of overhead for ...
enhancement
  • lightning-auriga
  • Opened 
    on Dec 14, 2023
  • #9

As a condition of running snakemake_unit_tests on the repo, the project requires some form of test data, which in this case means some variant callset for some subject in HG001-HG007. It would probably ...
documentation
enhancement
testing
  • lightning-auriga
  • Opened 
    on Dec 14, 2023
  • #8

The logic used for SV evaluation is a bit rushed and ad hoc. It seemed to be working when initially deployed, but in addition to having tests added to it in #3, it could use some streamlining, and definitely ...
documentation
enhancement
  • lightning-auriga
  • Opened 
    on Dec 14, 2023
  • #7

The output report is a bit barebones. It could be prettified, and possibly could have more stuff added to it.
documentation
enhancement
  • lightning-auriga
  • Opened 
    on Dec 14, 2023
  • #6

Configuration for stratification regions is somewhat messy. It could use some cleaning and/or refactoring.
enhancement
  • lightning-auriga
  • Opened 
    on Dec 14, 2023
  • #5

The readme is rather inadequate for this project. It needs to be reviewed, and possibly there should be a readthedocs deployment for this project for the purposes of publication.
documentation
  • lightning-auriga
  • Opened 
    on Dec 14, 2023
  • #4
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