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41 Open 98 Closed
41 Open 98 Closed
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Issues list

account for Helix Group rotation properly in oxdna/oxview export
#309 opened Oct 15, 2024 by dave-doty
@DanielHader
import (previously exported) cadnano design with paranemic crossover bug Something isn't working
#308 opened Oct 13, 2024 by dave-doty
1
@tcosmo
6
allow per-helix-group geometry closed in dev enhancement New feature or request
#306 opened Sep 21, 2024 by dave-doty
1
@dave-doty
1
update packaging action invalid This doesn't seem right
#305 opened Jul 25, 2024 by dave-doty
@rayzhuca @kbaow
Typo in 'set_dna_sequence' comment closed in dev documentation Improvements or additions to documentation
#304 opened Jun 28, 2024 by Phillip-Drake
implement thermodynamic analysis of stability of origami challenging enhancement New feature or request
#303 opened Apr 23, 2024 by dave-doty
separate Github actions for release notes and PyPi publishing invalid This doesn't seem right
#302 opened Mar 30, 2024 by dave-doty
@rayzhuca @kbaow
fix PyPi publishing bug Something isn't working high priority Something cruicial to get working soon.
#301 opened Mar 28, 2024 by dave-doty
@rayzhuca @kbaow
1
fix readthedocs updating bug Something isn't working closed in dev high priority Something cruicial to get working soon.
#290 opened Dec 20, 2023 by dave-doty
1
@rayzhuca
4
option to display some domains with dashed or squiggly lines enhancement New feature or request
#286 opened Oct 14, 2023 by dave-doty
option to make end offsets inclusive challenging high priority Something cruicial to get working soon. invalid This doesn't seem right
#271 opened Aug 23, 2023 by dave-doty
fix unit test installation error bug Something isn't working
#263 opened Jul 18, 2023 by dave-doty
@rayzhuca @kbaow
Importing deletions on 5'/3' staple end from Cadnano enhancement New feature or request
#260 opened Jun 20, 2023 by dave-doty
@rishabhmudradi @pranav-gupta1
@EdwinChang24 @Aaron-Lin-0
1
unit tests failing due to version incompatibility bug Something isn't working high priority Something cruicial to get working soon.
#259 opened Apr 4, 2023 by dave-doty
@rishabhmudradi @sarahayu
space out nucleotides in oxDNA export of loopouts invalid This doesn't seem right
#253 opened Nov 30, 2022 by dave-doty
oxDNA Export with Helix Group Pitch / Yaw Bug bug Something isn't working high priority Something cruicial to get working soon.
#249 opened Nov 25, 2022 by ajvetturini
@abhishekgokhale
3
shared binding domains challenging enhancement New feature or request
#248 opened Sep 30, 2022 by dave-doty
oxDNA file export with filename does not set extension
#245 opened Sep 9, 2022 by cgevans
Design.from_scadnano_file has no option to suppress warnings for duplicate strand names
#242 opened Sep 9, 2022 by cgevans
export Bioneer files enhancement New feature or request
#239 opened Aug 26, 2022 by dave-doty
raise exception on unpaired insertions/deletions in Design.inline_insertions_deletions and oxDNA/oxView/CanDo export invalid This doesn't seem right
#227 opened Apr 5, 2022 by dave-doty
@dave-doty
make tutorial that uses chained methods documentation Improvements or additions to documentation
#204 opened Nov 13, 2021 by dave-doty
fix crash error in assignment of DNA to design with deletion on one domain but not other bug Something isn't working high priority Something cruicial to get working soon.
#203 opened Nov 11, 2021 by dave-doty
@dave-doty
cadnano import should use helices_view_order to preserve the main view ordering of helices as they appear in cadnano bug Something isn't working high priority Something cruicial to get working soon.
#202 opened Nov 11, 2021 by dave-doty
@tcosmo
6
custom SVG position of helices enhancement New feature or request
#197 opened Oct 28, 2021 by dave-doty
ProTip! Exclude everything labeled bug with -label:bug.