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v1.2.0

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@tronbfxdev tronbfxdev released this 06 May 11:46
· 97 commits to master since this release
  • Forces the Java version in the conda environment to openJDK 8
  • Fixes an issue with the collection of duplication metrics
  • Add parameters for minimum base and mapping quality in the CollectHsMetrics step
  • Realignment around indels does not require now the indel resources
  • References are not set by default to hg19 now