Skip to content

Commit

Permalink
fixed issue with setup with althome
Browse files Browse the repository at this point in the history
  • Loading branch information
@danielfang97
danielfang97 committed May 13, 2024
1 parent 863a41e commit 13a115c
Show file tree
Hide file tree
Showing 10 changed files with 535 additions and 535 deletions.
2 changes: 1 addition & 1 deletion lib/views/setup.js
View file
Original file line number Diff line number Diff line change
Expand Up @@ -98,7 +98,7 @@ async function setupPost (req, res, settings) {
frontendURL: req.body.frontendURL || '',
instanceUrl: req.body.instanceUrl,
uriPrefix: req.body.uriPrefix,
altHome: req.body.altHome,
altHome: req.body.altHome || '',
userName: req.body.userName,
affiliation: req.body.affiliation,
userFullName: req.body.userFullName,
Expand Down
438 changes: 219 additions & 219 deletions tests/previousresults/get_file_public-:collectionId-:displayId-:version-gff_.xml
View file

Large diffs are not rendered by default.

Binary file modified tests/previousresults/get_file_public-:collectionId-:displayId-:version-omex_.xml
View file
Binary file not shown.
60 changes: 30 additions & 30 deletions tests/previousresults/get_file_public-:collectionId-:displayId-:version-sbol_.xml
View file
Original file line number Diff line number Diff line change
Expand Up @@ -11,24 +11,24 @@
<sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
<sbol:role rdf:resource="http://identifiers.org/so/SO:0000280"/>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1"/>
<sbol:displayId>pIKERightCassette_1</sbol:displayId>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1"/>
<sbol:displayId>pIKELeftCassette_1</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/1"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1"/>
<sbol:displayId>pIKELeftCassette_1</sbol:displayId>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1"/>
<sbol:displayId>pIKERightCassette_1</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/1"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
Expand Down Expand Up @@ -87,6 +87,17 @@
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
<sbol:role rdf:resource="http://identifiers.org/so/SO:0000280"/>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/ECK120029600/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/ECK120029600"/>
<sbol:displayId>ECK120029600</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/ECK120029600/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/BBa_R0040/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/BBa_R0040"/>
Expand Down Expand Up @@ -120,17 +131,6 @@
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/ECK120029600/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/ECK120029600"/>
<sbol:displayId>ECK120029600</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/ECK120029600/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:sequenceAnnotation>
<sbol:SequenceAnnotation rdf:about="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/anno1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/anno1"/>
Expand Down Expand Up @@ -230,6 +230,17 @@
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
<sbol:role rdf:resource="http://identifiers.org/so/SO:0000280"/>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61130/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61130"/>
<sbol:displayId>BBa_J61130</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/BBa_J61130/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61120/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61120"/>
Expand Down Expand Up @@ -285,17 +296,6 @@
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61130/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61130"/>
<sbol:displayId>BBa_J61130</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/BBa_J61130/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:sequenceAnnotation>
<sbol:SequenceAnnotation rdf:about="http://localhost:7777/public/testid1/part_pIKERightCassette_1/anno1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/anno1"/>
Expand Down
16 changes: 8 additions & 8 deletions tests/previousresults/get_file_public-:collectionId-:displayId-:version-sbolnr_.xml
View file
Original file line number Diff line number Diff line change
Expand Up @@ -11,24 +11,24 @@
<sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
<sbol:role rdf:resource="http://identifiers.org/so/SO:0000280"/>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1"/>
<sbol:displayId>pIKERightCassette_1</sbol:displayId>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1"/>
<sbol:displayId>pIKELeftCassette_1</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/1"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1"/>
<sbol:displayId>pIKELeftCassette_1</sbol:displayId>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1"/>
<sbol:displayId>pIKERightCassette_1</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/1"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
Expand Down
60 changes: 30 additions & 30 deletions tests/previousresults/get_file_public-:collectionId-:displayId-sbol_.xml
View file
Original file line number Diff line number Diff line change
Expand Up @@ -11,24 +11,24 @@
<sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
<sbol:role rdf:resource="http://identifiers.org/so/SO:0000280"/>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1"/>
<sbol:displayId>pIKERightCassette_1</sbol:displayId>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1"/>
<sbol:displayId>pIKELeftCassette_1</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/1"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKELeftCassette_1"/>
<sbol:displayId>pIKELeftCassette_1</sbol:displayId>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/pIKERightCassette_1"/>
<sbol:displayId>pIKERightCassette_1</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKE_Toggle_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/1"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
Expand Down Expand Up @@ -87,6 +87,17 @@
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
<sbol:role rdf:resource="http://identifiers.org/so/SO:0000280"/>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/ECK120029600/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/ECK120029600"/>
<sbol:displayId>ECK120029600</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/ECK120029600/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/BBa_R0040/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/BBa_R0040"/>
Expand Down Expand Up @@ -120,17 +131,6 @@
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/ECK120029600/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/ECK120029600"/>
<sbol:displayId>ECK120029600</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/ECK120029600/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:sequenceAnnotation>
<sbol:SequenceAnnotation rdf:about="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/anno1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKELeftCassette_1/anno1"/>
Expand Down Expand Up @@ -230,6 +230,17 @@
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
<sbol:role rdf:resource="http://identifiers.org/so/SO:0000280"/>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61130/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61130"/>
<sbol:displayId>BBa_J61130</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/BBa_J61130/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61120/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61120"/>
Expand Down Expand Up @@ -285,17 +296,6 @@
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:component>
<sbol:Component rdf:about="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61130/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/BBa_J61130"/>
<sbol:displayId>BBa_J61130</sbol:displayId>
<sbol:version>1</sbol:version>
<sbh:topLevel rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/1"/>
<sbh:ownedBy rdf:resource="http://localhost:7777/user/testuser"/>
<sbol:definition rdf:resource="http://localhost:7777/public/testid1/BBa_J61130/1"/>
<sbol:access rdf:resource="http://sbols.org/v2#public"/>
</sbol:Component>
</sbol:component>
<sbol:sequenceAnnotation>
<sbol:SequenceAnnotation rdf:about="http://localhost:7777/public/testid1/part_pIKERightCassette_1/anno1/1">
<sbol:persistentIdentity rdf:resource="http://localhost:7777/public/testid1/part_pIKERightCassette_1/anno1"/>
Expand Down
Loading

0 comments on commit 13a115c

Please sign in to comment.