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cursor.go
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cursor.go
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package ghostferry
import (
sqlorig "database/sql"
"fmt"
sql "github.com/Shopify/ghostferry/sqlwrapper"
"strings"
"github.com/Masterminds/squirrel"
"github.com/go-mysql-org/go-mysql/schema"
"github.com/sirupsen/logrus"
)
// both `sql.Tx` and `sql.DB` allow a SQL query to be `Prepare`d
type SqlPreparer interface {
Prepare(string) (*sqlorig.Stmt, error)
}
type SqlDBWithFakeRollback struct {
*sql.DB
}
func (d *SqlDBWithFakeRollback) Rollback() error {
return nil
}
// sql.DB does not implement Rollback, but can use SqlDBWithFakeRollback
// to perform a noop.
type SqlPreparerAndRollbacker interface {
SqlPreparer
Rollback() error
}
type CursorConfig struct {
DB *sql.DB
Throttler Throttler
ColumnsToSelect []string
BuildSelect func([]string, *TableSchema, uint64, uint64) (squirrel.SelectBuilder, error)
// BatchSize is a pointer to the BatchSize in Config.UpdatableConfig which can be independently updated from this code.
// Having it as a pointer allows the updated value to be read without needing additional code to copy the batch size value into the cursor config for each cursor we create.
BatchSize *uint64
BatchSizePerTableOverride *DataIterationBatchSizePerTableOverride
ReadRetries int
}
// returns a new Cursor with an embedded copy of itself
func (c *CursorConfig) NewCursor(table *TableSchema, startPaginationKey, maxPaginationKey uint64) *Cursor {
return &Cursor{
CursorConfig: *c,
Table: table,
MaxPaginationKey: maxPaginationKey,
RowLock: true,
lastSuccessfulPaginationKey: startPaginationKey,
}
}
// returns a new Cursor with an embedded copy of itself
func (c *CursorConfig) NewCursorWithoutRowLock(table *TableSchema, startPaginationKey, maxPaginationKey uint64) *Cursor {
cursor := c.NewCursor(table, startPaginationKey, maxPaginationKey)
cursor.RowLock = false
return cursor
}
func (c CursorConfig) GetBatchSize(schemaName string, tableName string) uint64 {
if c.BatchSizePerTableOverride != nil {
if batchSize, found := c.BatchSizePerTableOverride.TableOverride[schemaName][tableName]; found {
return batchSize
}
}
return *c.BatchSize
}
type Cursor struct {
CursorConfig
Table *TableSchema
MaxPaginationKey uint64
RowLock bool
paginationKeyColumn *schema.TableColumn
lastSuccessfulPaginationKey uint64
logger *logrus.Entry
}
func (c *Cursor) Each(f func(*RowBatch) error) error {
c.logger = logrus.WithFields(logrus.Fields{
"table": c.Table.String(),
"tag": "cursor",
})
c.paginationKeyColumn = c.Table.GetPaginationColumn()
if len(c.ColumnsToSelect) == 0 {
c.ColumnsToSelect = []string{"*"}
}
for c.lastSuccessfulPaginationKey < c.MaxPaginationKey {
var tx SqlPreparerAndRollbacker
var batch *RowBatch
var paginationKeypos uint64
err := WithRetries(c.ReadRetries, 0, c.logger, "fetch rows", func() (err error) {
if c.Throttler != nil {
WaitForThrottle(c.Throttler)
}
// Only need to use a transaction if RowLock == true. Otherwise
// we'd be wasting two extra round trips per batch, doing
// essentially a no-op.
if c.RowLock {
tx, err = c.DB.Begin()
if err != nil {
return err
}
} else {
tx = &SqlDBWithFakeRollback{c.DB}
}
batch, paginationKeypos, err = c.Fetch(tx)
if err == nil {
return nil
}
tx.Rollback()
return err
})
if err != nil {
return err
}
if batch.Size() == 0 {
tx.Rollback()
c.logger.Debug("did not reach max primary key, but the table is complete as there are no more rows")
break
}
if paginationKeypos <= c.lastSuccessfulPaginationKey {
tx.Rollback()
err = fmt.Errorf("new paginationKeypos %d <= lastSuccessfulPaginationKey %d", paginationKeypos, c.lastSuccessfulPaginationKey)
c.logger.WithError(err).Errorf("last successful paginationKey position did not advance")
return err
}
err = f(batch)
if err != nil {
tx.Rollback()
c.logger.WithError(err).Error("failed to call each callback")
return err
}
tx.Rollback()
c.lastSuccessfulPaginationKey = paginationKeypos
}
return nil
}
func (c *Cursor) Fetch(db SqlPreparer) (batch *RowBatch, paginationKeypos uint64, err error) {
var selectBuilder squirrel.SelectBuilder
batchSize := c.CursorConfig.GetBatchSize(c.Table.Schema, c.Table.Name)
if c.BuildSelect != nil {
selectBuilder, err = c.BuildSelect(c.ColumnsToSelect, c.Table, c.lastSuccessfulPaginationKey, batchSize)
if err != nil {
c.logger.WithError(err).Error("failed to apply filter for select")
return
}
} else {
selectBuilder = DefaultBuildSelect(c.ColumnsToSelect, c.Table, c.lastSuccessfulPaginationKey, batchSize)
}
if c.RowLock {
selectBuilder = selectBuilder.Suffix("FOR UPDATE")
}
query, args, err := selectBuilder.ToSql()
if err != nil {
c.logger.WithError(err).Error("failed to build chunking sql")
return
}
// With the inline verifier, the columns to be selected may be very large as
// the query generated will be very large. The code here simply hides the
// columns from the logger to not spam the logs.
splitQuery := strings.Split(query, "FROM")
loggedQuery := fmt.Sprintf("SELECT [omitted] FROM %s", splitQuery[1])
logger := c.logger.WithFields(logrus.Fields{
"sql": loggedQuery,
"args": args,
})
// This query must be a prepared query. If it is not, querying will use
// MySQL's plain text interface, which will scan all values into []uint8
// if we give it []interface{}.
stmt, err := db.Prepare(query)
if err != nil {
logger.WithError(err).Error("failed to prepare query")
return
}
defer stmt.Close()
rows, err := stmt.Query(args...)
if err != nil {
logger.WithError(err).Error("failed to query database")
return
}
defer rows.Close()
columns, err := rows.Columns()
if err != nil {
logger.WithError(err).Error("failed to get columns")
return
}
var paginationKeyIndex int = -1
for idx, col := range columns {
if col == c.paginationKeyColumn.Name {
paginationKeyIndex = idx
break
}
}
if paginationKeyIndex < 0 {
err = fmt.Errorf("paginationKey is not found during iteration with columns: %v", columns)
logger.WithError(err).Error("failed to get paginationKey index")
return
}
var rowData RowData
var batchData []RowData
for rows.Next() {
rowData, err = ScanGenericRow(rows, len(columns))
if err != nil {
logger.WithError(err).Error("failed to scan row")
return
}
batchData = append(batchData, rowData)
}
err = rows.Err()
if err != nil {
return
}
if len(batchData) > 0 {
paginationKeypos, err = batchData[len(batchData)-1].GetUint64(paginationKeyIndex)
if err != nil {
logger.WithError(err).Error("failed to get uint64 paginationKey value")
return
}
}
batch = &RowBatch{
values: batchData,
paginationKeyIndex: paginationKeyIndex,
table: c.Table,
columns: columns,
}
logger.Debugf("found %d rows", batch.Size())
return
}
func ScanGenericRow(rows *sqlorig.Rows, columnCount int) (RowData, error) {
values := make(RowData, columnCount)
valuePtrs := make(RowData, columnCount)
for i, _ := range values {
valuePtrs[i] = &values[i]
}
err := rows.Scan(valuePtrs...)
return values, err
}
func ScanByteRow(rows *sqlorig.Rows, columnCount int) ([][]byte, error) {
values := make([][]byte, columnCount)
valuePtrs := make(RowData, columnCount)
for i, _ := range values {
valuePtrs[i] = &values[i]
}
err := rows.Scan(valuePtrs...)
return values, err
}
func DefaultBuildSelect(columns []string, table *TableSchema, lastPaginationKey, batchSize uint64) squirrel.SelectBuilder {
quotedPaginationKey := QuoteField(table.GetPaginationColumn().Name)
return squirrel.Select(columns...).
From(QuotedTableName(table)).
Where(squirrel.Gt{quotedPaginationKey: lastPaginationKey}).
Limit(batchSize).
OrderBy(quotedPaginationKey)
}