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It looks like this key is no longer used in the latest version. DELETE FROM config_metadata WHERE key = 'executor.module.path.dummy-module'; should fix it.
I have set exectuor.module.path.dummy-module to /usr/share/sen2agri to get rid of the error. I am leaving this issue open since the installation steps in the manual should be replicatable.
After a fresh install, and when trying to launch
sen2agri-config
an error is shown. Further configuration is not possible from here on.EDIT:
After running the install script a second time, the error changed to
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