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This package provides code for simulating acoustic-trawl survey estimates from spatial biomass data, developed for the PELFOSS project (Observational system simulator for pelagic fish stocks)
Sea2Data/pelfoss
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# pelfoss version: 1.2.2 (latest alpha, 2020-06-11) # R version: 3.5.0 # The package pelfoss contains code to simulate acoustic-trawl surveys based on biomass fields from population dynamic models, and produces survey estimates using the Rstox package: # IMPORTANT: The package pelfoss stongly depends on the package Rstox. Install Rstox as described on https://github.com/Sea2Data/Rstox # Install the other packages that perlfoss depends on. Note that this updates all the specified packages to the latest (binary) version: dep.pck <- c("data.table", "fields", "ggnewscale", "ggplot2", "interp", "maptools", "ncdf4", "sp") install.packages(dep.pck, repos="http://cran.us.r-project.org", type="binary") # Install pelfoss from github using the devtools package: devtools::install_github("Sea2Data/pelfoss") # Alternatively install the latest develop version: devtools::install_github("Sea2Data/pelfoss", ref="develop") # Release notes pelfoss_1.2.2: # 1. Fixed bug where # For historical release notes see https://github.com/Sea2Data/pelfoss/blob/alpha/NEWS
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This package provides code for simulating acoustic-trawl survey estimates from spatial biomass data, developed for the PELFOSS project (Observational system simulator for pelagic fish stocks)
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