Modernize #65
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Modernize #65
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Relocated 'environment.yaml' and 'requirements.txt' to a dedicated 'envs/' directory for better organization. This change improves project structure and simplifies environment file management.
Introduce a Dependabot configuration file to automate version checks for GitHub Actions. The setup schedules weekly checks and ensures actions are kept up to date via pull requests. This improves maintenance and security by automating dependency updates.
This workflow triggers on issue or PR creation and reopening events. It uses a shared workflow from UBC-MOAD/gha-workflows/.
This commit introduces a GitHub Actions workflow to run CodeQL analysis. It helps identify potential security vulnerabilities in Python code with scheduled weekly scans and branch-specific triggers.
Create a new conda environment file for testing and coverage analysis, specifying required dependencies for testing the SOG-Bloomcast-Ensemble package. Add a GitHub Actions workflow to automate running pytest with coverage checks and reporting. The workflow uses a reusable workflow from UBC-MOAD/gha-workflows.
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This pull request sets up GitHub code scanning for this repository. Once the scans have completed and the checks have passed, the analysis results for this pull request branch will appear on this overview. Once you merge this pull request, the 'Security' tab will show more code scanning analysis results (for example, for the default branch). Depending on your configuration and choice of analysis tool, future pull requests will be annotated with code scanning analysis results. For more information about GitHub code scanning, check out the documentation. |
Updated the test environment file to include installation of the SOG package in editable mode via a GitHub URL. This ensures the latest SOG code is pulled directly from the repository, alongside the existing SOG-Bloomcast-Ensemble package.
Renamed `environment.yml` to `environment-dev.yaml` and updated the environment name to `bloomcast-dev` for clarity and consistency. Adjusted setup instructions to reflect these changes, aligning the naming convention with development-specific purposes.
Initial hooks: * Code formatting by black * Trim trailing whitespace * Ensure that files are either empty, or end with one newline * Confirm that YAML files have parsable syntax * Confirm that TOML files have parsable syntax * Prevent files larger than 500 kB from being committed
Updated environment-dev.yaml to include pytest-cov for test coverage monitoring and pytest-randomly for randomized test execution. These additions aim to improve testing comprehensiveness and robustness.
As recommended for reproducible builds on readthedocs: https://docs.readthedocs.io/en/stable/guides/reproducible-builds.html and to ensure that our docs build works with readthedocs changes to default project dependencies: https://blog.readthedocs.com/defaulting-latest-build-tools/
Replaced setup.py with pyproject.toml to modernize the project's build system and comply with PEP 518 standards. Updated references in the codebase to use the new configuration format. This change simplifies dependency management and aligns the project with current Python packaging practices.
Updated `pyproject.toml` to replace Setuptools with Hatchling as the build system. Added Hatch to the dev environment dependencies in `environment-dev.yaml` for package management and consistency. Removed Setuptools-specific configurations and aligned the project with Hatch's requirements.
Centralize package metadata in `pyproject.toml` and `bloomcast/__about__.py`, removing legacy `__pkg_metadata__.py`. Updated Sphinx configuration to dynamically fetch metadata, modernizing the documentation setup. Adjusted authors list and introduced version automation with Hatch.
Updated the project name and package references in pyproject.toml to address CI test import failures.
Transitioned the coverage settings to pyproject.toml for a cleaner and centralized configuration. Removed the redundant .coveragerc file as its contents are now fully integrated into the project’s primary configuration file.
Include pytest minimum version and the `tests/` path in pyproject.toml. This is done to avoid collection of the dependency `env/src/sogcommand/SOGcommand/tests/` directory in the GHA pytest-with-coverage workflow.
Welcome to Codecov 🎉Once you merge this PR into your default branch, you're all set! Codecov will compare coverage reports and display results in all future pull requests. Thanks for integrating Codecov - We've got you covered ☂️ |
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requirements.txttoenvs/directory