From 89da9b0d3392f9962ad64b8083412642b5ea784b Mon Sep 17 00:00:00 2001 From: coltonlloyd Date: Mon, 21 May 2018 16:56:50 -0700 Subject: [PATCH] Update README --- README.rst | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/README.rst b/README.rst index 1479d00..e71e0fe 100644 --- a/README.rst +++ b/README.rst @@ -25,9 +25,11 @@ Build ME-model -------------- A full COBRAme ME-model currently only exists for *E. coli* K-12 MG1655. See the ECOLIme_ package for the data and scripts required to build iJL1678b-ME. After installing ECOLIme_, iJL1678b-ME can be constructed from scratch by running `build_ME_model.py `_. +**Note:** ECOLIme and COBRAme are versioned together (i.e. version 0.0.8 of ECOLIme should be used with version 0.0.8 of COBRAme, etc.) + Solving ------- -ME-models are inherently ill-scaled and thus require extended precision solvers in to be solved accurately. COBRAme currently supports the use of two such solvers: **qMINOS** (128-bit precision) and **SoPlex** (80-bit precision). Both solvers are freely avaialbe for academic use. For further examples, refer to `solve_demo.ipynb `_ +ME-models are inherently ill-scaled and thus require extended precision solvers in to be solved accurately. COBRAme currently supports the use of two such solvers: **qMINOS** (128-bit precision) and **SoPlex** (80-bit precision). Both solvers are freely available for academic use. For further examples, refer to `solve_demo.ipynb `_ qMINOS ~~~~~~