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pemba_tz_n153_timescaled.mcc.tre
executable file
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pemba_tz_n153_timescaled.mcc.tre
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#NEXUS
Begin taxa;
Dimensions ntax=153;
Taxlabels
'PM015_09-11-2016_Pemba.fasta'
'PM018_17-02-2017_Pemba.fasta'
'PM019_05-02-2017_Pemba.fasta'
'PM023_12-05-2017_Pemba.fasta'
'PM024_14-05-2017_Pemba.fasta'
'RAB12002_15-06-2012_Pemba.fasta'
'RAB12005_09-05-2012_Pemba.fasta'
'RAB12039_24-08-2011_Pemba.fasta'
'RAB16024_21-09-2016_Pemba.fasta'
'RAB16025_21-09-2016_Pemba.fasta'
'RAB16026_16-09-2016_Pemba.fasta'
'RAB16027_07-10-2016_Pemba.fasta'
'RAB16028_04-10-2016_Pemba.fasta'
'RAB16029_05-10-2016_Pemba.fasta'
'RAB16031_15-09-2016_Pemba.fasta'
'RAB16033_07-10-2016_Pemba.fasta'
'RV2483_28-09-2008_Serengeti.fasta'
'RV2485_28-09-2008_Serengeti.fasta'
'RV2489_17-01-2009_Serengeti.fasta'
'RV2490_07-08-2008_Serengeti.fasta'
'RV2491_02-08-2008_Serengeti.fasta'
'RV2493_31-07-2008_Serengeti.fasta'
'RV2498_06-08-2008_Ulanga.fasta'
'RV2499_05-08-2008_Ulanga.fasta'
'RV2500_23-11-2008_Serengeti.fasta'
'RV2501_14-02-2004_Serengeti.fasta'
'RV2503_15-02-2009_Serengeti.fasta'
'RV2504_18-06-2003_Ngorongoro.fasta'
'RV2767_12-09-2009_Serengeti.fasta'
'RV2772_02-08-2010_Kibaha.fasta'
'RV2773_26-10-2010_Kibaha.fasta'
'RV2777_15-12-2010_Pemba.fasta'
'RV2778_15-12-2010_Pemba.fasta'
'RV2783_28-02-2011_Newala.fasta'
'RV2784_28-02-2011_Nachingwea.fasta'
'RV2786_20-06-2010_Serengeti.fasta'
'RV2789_22-10-2010_Serengeti.fasta'
'RV2792_07-01-2011_Serengeti.fasta'
'RV2793_02-01-2011_Serengeti.fasta'
'RV2794_12-01-2011_Serengeti.fasta'
'RV2796_19-01-2011_Serengeti.fasta'
'RV2797_30-01-2011_Serengeti.fasta'
'RV2798_31-01-2011_Serengeti.fasta'
'RV2799_29-01-2011_Serengeti.fasta'
'RV2808_04-04-2010_Morogoro.fasta'
'RV2810_23-04-2010_Morogoro.fasta'
'RV2811_24-04-2010_Morogoro.fasta'
'RV2813_29-04-2010_Morogoro.fasta'
'RV2814_17-05-2010_Ulanga.fasta'
'RV2815_27-09-2010_Kilombero.fasta'
'RV2816_28-09-2010_Kilombero.fasta'
'RV2817_26-11-2010_Pemba.fasta'
'RV2858_21-02-2011_Serengeti.fasta'
'RV2859_01-03-2011_Serengeti.fasta'
'RV2861_11-05-2011_Serengeti.fasta'
'RV2862_11-05-2011_Serengeti.fasta'
'RV2866_15-04-2011_Serengeti.fasta'
'RV2867_22-05-2011_Serengeti.fasta'
'RV2868_06-06-2011_Serengeti.fasta'
'RV2870_01-06-2011_Serengeti.fasta'
'RV2873_20-06-2011_Serengeti.fasta'
'RV2878_03-07-2011_Serengeti.fasta'
'RV2879_10-06-2011_Serengeti.fasta'
'RV2880_02-07-2011_Serengeti.fasta'
'RV2882_23-07-2011_Serengeti.fasta'
'RV2883_23-07-2011_Serengeti.fasta'
'RV2885_24-07-2011_Serengeti.fasta'
'RV2887_25-07-2011_Serengeti.fasta'
'RV2888_29-07-2011_Serengeti.fasta'
'RV2889_04-08-2011_Serengeti.fasta'
'RV2890_03-08-2011_Serengeti.fasta'
'RV2891_10-08-2011_Serengeti.fasta'
'RV2892_12-08-2011_Serengeti.fasta'
'RV2893_01-08-2011_Serengeti.fasta'
'RV2894_15-08-2011_Serengeti.fasta'
'RV2895_18-08-2011_Serengeti.fasta'
'RV2896_19-08-2011_Serengeti.fasta'
'RV2897_02-09-2011_Serengeti.fasta'
'RV2900_28-09-2011_Serengeti.fasta'
'RV2903_05-10-2011_Serengeti.fasta'
'RV2906_09-09-2011_Serengeti.fasta'
'RV2909_12-11-2011_Serengeti.fasta'
'RV2932_11-06-2007_Same.fasta'
'RV2934_15-06-2007_Dodoma.fasta'
'RV2949_17-07-2009_Dodoma.fasta'
'RV3048_17-09-2012_Serengeti.fasta'
'RV3049_04-10-2012_Serengeti.fasta'
'RV3050_02-09-2012_Serengeti.fasta'
'RV3051_13-10-2012_Serengeti.fasta'
'RV3052_13-11-2012_Serengeti.fasta'
'RV3053_10-11-2012_Serengeti.fasta'
'RV3064_02-01-2013_Serengeti.fasta'
'RV3066_22-02-2013_Serengeti.fasta'
'RV3067_25-02-2013_Serengeti.fasta'
'RV3070_27-02-2013_Serengeti.fasta'
'RV3073_18-02-2013_Serengeti.fasta'
'RV3075_31-01-2013_Serengeti.fasta'
'RV3078_26-05-2013_Serengeti.fasta'
'RV3082_03-09-2013_Serengeti.fasta'
'RV3084_22-08-2013_Serengeti.fasta'
'RV3085_06-09-2013_Serengeti.fasta'
'RV3088_25-04-2013_Serengeti.fasta'
'RV3092_16-12-2011_Serengeti.fasta'
'RV3093_22-12-2011_Serengeti.fasta'
'RV3103_10-12-2011_Serengeti.fasta'
'RV3104_22-12-2011_Serengeti.fasta'
'RV3105_22-03-2012_Serengeti.fasta'
'RV3107_09-04-2012_Serengeti.fasta'
'RV3109_12-04-2012_Serengeti.fasta'
'RV3110_30-04-2012_Serengeti.fasta'
'RV3111_29-04-2012_Serengeti.fasta'
'RV3113_06-05-2012_Serengeti.fasta'
'RV3114_06-05-2012_Serengeti.fasta'
'RV3115_11-05-2012_Serengeti.fasta'
'RV3116_07-05-2012_Serengeti.fasta'
'RV3117_12-05-2012_Serengeti.fasta'
'RV3119_17-05-2012_Serengeti.fasta'
'RV3122_30-03-2012_Serengeti.fasta'
'RV3123_26-04-2012_Serengeti.fasta'
'RV3124_07-05-2012_Serengeti.fasta'
'RV3128_16-06-2012_Serengeti.fasta'
'RV3129_25-06-2012_Serengeti.fasta'
'RV3130_28-06-2012_Serengeti.fasta'
'RV3131_07-07-2012_Serengeti.fasta'
'RV3132_02-04-2012_Serengeti.fasta'
'RV3134_19-07-2012_Serengeti.fasta'
'RV3135_19-07-2012_Serengeti.fasta'
'RV3136_16-07-2012_Serengeti.fasta'
'RV3137_21-07-2012_Serengeti.fasta'
'RV3138_16-07-2012_Serengeti.fasta'
'RV3145_08-08-2012_Serengeti.fasta'
'RV3150_24-03-2012_Serengeti.fasta'
'RV3151_03-01-2012_Serengeti.fasta'
'RV3229_05-01-2015_Serengeti.fasta'
'RV3240_22-05-2015_Serengeti.fasta'
'RV3253_04-06-2015_Serengeti.fasta'
'SD577_30-09-2015_Serengeti.fasta'
'SD577sg_30-09-2015_Serengeti.fasta'
'SD601_17-12-2015_Serengeti.fasta'
'SD620_20-02-2016_Serengeti.fasta'
'SD622_15-02-2016_Serengeti.fasta'
'SD635_07-06-2016_Serengeti.fasta'
'SD641_05-04-2017_Serengeti.fasta'
'SD643_14-05-2017_Serengeti.fasta'
'SD645_30-12-2016_Serengeti.fasta'
'SD647_18-08-2016_Serengeti.fasta'
'SD648_31-03-2017_Serengeti.fasta'
'SD670_11-04-2017_Serengeti.fasta'
'SD678_06-10-2016_Serengeti.fasta'
'SD681_08-09-2017_Serengeti.fasta'
'SD709_08-09-2017_Serengeti.fasta'
'SUB7087_19-10-2001_Temeke.fasta'
'SUB7101_24-09-2015_Serengeti.fasta'
;
End;
Begin trees;
Translate
1 'PM015_09-11-2016_Pemba.fasta',
2 'PM018_17-02-2017_Pemba.fasta',
3 'PM019_05-02-2017_Pemba.fasta',
4 'PM023_12-05-2017_Pemba.fasta',
5 'PM024_14-05-2017_Pemba.fasta',
6 'RAB12002_15-06-2012_Pemba.fasta',
7 'RAB12005_09-05-2012_Pemba.fasta',
8 'RAB12039_24-08-2011_Pemba.fasta',
9 'RAB16024_21-09-2016_Pemba.fasta',
10 'RAB16025_21-09-2016_Pemba.fasta',
11 'RAB16026_16-09-2016_Pemba.fasta',
12 'RAB16027_07-10-2016_Pemba.fasta',
13 'RAB16028_04-10-2016_Pemba.fasta',
14 'RAB16029_05-10-2016_Pemba.fasta',
15 'RAB16031_15-09-2016_Pemba.fasta',
16 'RAB16033_07-10-2016_Pemba.fasta',
17 'RV2483_28-09-2008_Serengeti.fasta',
18 'RV2485_28-09-2008_Serengeti.fasta',
19 'RV2489_17-01-2009_Serengeti.fasta',
20 'RV2490_07-08-2008_Serengeti.fasta',
21 'RV2491_02-08-2008_Serengeti.fasta',
22 'RV2493_31-07-2008_Serengeti.fasta',
23 'RV2498_06-08-2008_Ulanga.fasta',
24 'RV2499_05-08-2008_Ulanga.fasta',
25 'RV2500_23-11-2008_Serengeti.fasta',
26 'RV2501_14-02-2004_Serengeti.fasta',
27 'RV2503_15-02-2009_Serengeti.fasta',
28 'RV2504_18-06-2003_Ngorongoro.fasta',
29 'RV2767_12-09-2009_Serengeti.fasta',
30 'RV2772_02-08-2010_Kibaha.fasta',
31 'RV2773_26-10-2010_Kibaha.fasta',
32 'RV2777_15-12-2010_Pemba.fasta',
33 'RV2778_15-12-2010_Pemba.fasta',
34 'RV2783_28-02-2011_Newala.fasta',
35 'RV2784_28-02-2011_Nachingwea.fasta',
36 'RV2786_20-06-2010_Serengeti.fasta',
37 'RV2789_22-10-2010_Serengeti.fasta',
38 'RV2792_07-01-2011_Serengeti.fasta',
39 'RV2793_02-01-2011_Serengeti.fasta',
40 'RV2794_12-01-2011_Serengeti.fasta',
41 'RV2796_19-01-2011_Serengeti.fasta',
42 'RV2797_30-01-2011_Serengeti.fasta',
43 'RV2798_31-01-2011_Serengeti.fasta',
44 'RV2799_29-01-2011_Serengeti.fasta',
45 'RV2808_04-04-2010_Morogoro.fasta',
46 'RV2810_23-04-2010_Morogoro.fasta',
47 'RV2811_24-04-2010_Morogoro.fasta',
48 'RV2813_29-04-2010_Morogoro.fasta',
49 'RV2814_17-05-2010_Ulanga.fasta',
50 'RV2815_27-09-2010_Kilombero.fasta',
51 'RV2816_28-09-2010_Kilombero.fasta',
52 'RV2817_26-11-2010_Pemba.fasta',
53 'RV2858_21-02-2011_Serengeti.fasta',
54 'RV2859_01-03-2011_Serengeti.fasta',
55 'RV2861_11-05-2011_Serengeti.fasta',
56 'RV2862_11-05-2011_Serengeti.fasta',
57 'RV2866_15-04-2011_Serengeti.fasta',
58 'RV2867_22-05-2011_Serengeti.fasta',
59 'RV2868_06-06-2011_Serengeti.fasta',
60 'RV2870_01-06-2011_Serengeti.fasta',
61 'RV2873_20-06-2011_Serengeti.fasta',
62 'RV2878_03-07-2011_Serengeti.fasta',
63 'RV2879_10-06-2011_Serengeti.fasta',
64 'RV2880_02-07-2011_Serengeti.fasta',
65 'RV2882_23-07-2011_Serengeti.fasta',
66 'RV2883_23-07-2011_Serengeti.fasta',
67 'RV2885_24-07-2011_Serengeti.fasta',
68 'RV2887_25-07-2011_Serengeti.fasta',
69 'RV2888_29-07-2011_Serengeti.fasta',
70 'RV2889_04-08-2011_Serengeti.fasta',
71 'RV2890_03-08-2011_Serengeti.fasta',
72 'RV2891_10-08-2011_Serengeti.fasta',
73 'RV2892_12-08-2011_Serengeti.fasta',
74 'RV2893_01-08-2011_Serengeti.fasta',
75 'RV2894_15-08-2011_Serengeti.fasta',
76 'RV2895_18-08-2011_Serengeti.fasta',
77 'RV2896_19-08-2011_Serengeti.fasta',
78 'RV2897_02-09-2011_Serengeti.fasta',
79 'RV2900_28-09-2011_Serengeti.fasta',
80 'RV2903_05-10-2011_Serengeti.fasta',
81 'RV2906_09-09-2011_Serengeti.fasta',
82 'RV2909_12-11-2011_Serengeti.fasta',
83 'RV2932_11-06-2007_Same.fasta',
84 'RV2934_15-06-2007_Dodoma.fasta',
85 'RV2949_17-07-2009_Dodoma.fasta',
86 'RV3048_17-09-2012_Serengeti.fasta',
87 'RV3049_04-10-2012_Serengeti.fasta',
88 'RV3050_02-09-2012_Serengeti.fasta',
89 'RV3051_13-10-2012_Serengeti.fasta',
90 'RV3052_13-11-2012_Serengeti.fasta',
91 'RV3053_10-11-2012_Serengeti.fasta',
92 'RV3064_02-01-2013_Serengeti.fasta',
93 'RV3066_22-02-2013_Serengeti.fasta',
94 'RV3067_25-02-2013_Serengeti.fasta',
95 'RV3070_27-02-2013_Serengeti.fasta',
96 'RV3073_18-02-2013_Serengeti.fasta',
97 'RV3075_31-01-2013_Serengeti.fasta',
98 'RV3078_26-05-2013_Serengeti.fasta',
99 'RV3082_03-09-2013_Serengeti.fasta',
100 'RV3084_22-08-2013_Serengeti.fasta',
101 'RV3085_06-09-2013_Serengeti.fasta',
102 'RV3088_25-04-2013_Serengeti.fasta',
103 'RV3092_16-12-2011_Serengeti.fasta',
104 'RV3093_22-12-2011_Serengeti.fasta',
105 'RV3103_10-12-2011_Serengeti.fasta',
106 'RV3104_22-12-2011_Serengeti.fasta',
107 'RV3105_22-03-2012_Serengeti.fasta',
108 'RV3107_09-04-2012_Serengeti.fasta',
109 'RV3109_12-04-2012_Serengeti.fasta',
110 'RV3110_30-04-2012_Serengeti.fasta',
111 'RV3111_29-04-2012_Serengeti.fasta',
112 'RV3113_06-05-2012_Serengeti.fasta',
113 'RV3114_06-05-2012_Serengeti.fasta',
114 'RV3115_11-05-2012_Serengeti.fasta',
115 'RV3116_07-05-2012_Serengeti.fasta',
116 'RV3117_12-05-2012_Serengeti.fasta',
117 'RV3119_17-05-2012_Serengeti.fasta',
118 'RV3122_30-03-2012_Serengeti.fasta',
119 'RV3123_26-04-2012_Serengeti.fasta',
120 'RV3124_07-05-2012_Serengeti.fasta',
121 'RV3128_16-06-2012_Serengeti.fasta',
122 'RV3129_25-06-2012_Serengeti.fasta',
123 'RV3130_28-06-2012_Serengeti.fasta',
124 'RV3131_07-07-2012_Serengeti.fasta',
125 'RV3132_02-04-2012_Serengeti.fasta',
126 'RV3134_19-07-2012_Serengeti.fasta',
127 'RV3135_19-07-2012_Serengeti.fasta',
128 'RV3136_16-07-2012_Serengeti.fasta',
129 'RV3137_21-07-2012_Serengeti.fasta',
130 'RV3138_16-07-2012_Serengeti.fasta',
131 'RV3145_08-08-2012_Serengeti.fasta',
132 'RV3150_24-03-2012_Serengeti.fasta',
133 'RV3151_03-01-2012_Serengeti.fasta',
134 'RV3229_05-01-2015_Serengeti.fasta',
135 'RV3240_22-05-2015_Serengeti.fasta',
136 'RV3253_04-06-2015_Serengeti.fasta',
137 'SD577_30-09-2015_Serengeti.fasta',
138 'SD577sg_30-09-2015_Serengeti.fasta',
139 'SD601_17-12-2015_Serengeti.fasta',
140 'SD620_20-02-2016_Serengeti.fasta',
141 'SD622_15-02-2016_Serengeti.fasta',
142 'SD635_07-06-2016_Serengeti.fasta',
143 'SD641_05-04-2017_Serengeti.fasta',
144 'SD643_14-05-2017_Serengeti.fasta',
145 'SD645_30-12-2016_Serengeti.fasta',
146 'SD647_18-08-2016_Serengeti.fasta',
147 'SD648_31-03-2017_Serengeti.fasta',
148 'SD670_11-04-2017_Serengeti.fasta',
149 'SD678_06-10-2016_Serengeti.fasta',
150 'SD681_08-09-2017_Serengeti.fasta',
151 'SD709_08-09-2017_Serengeti.fasta',
152 'SUB7087_19-10-2001_Temeke.fasta',
153 'SUB7101_24-09-2015_Serengeti.fasta'
;
tree TREE1 = [&R] 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