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pemba_non_timescaled.txt
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pemba_non_timescaled.txt
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tip date distance residual
RV3253_04-06-2015_Serengeti.fasta 2015.4219178082192 0.014269758361390224 0.0011554193895222456
RV3240_22-05-2015_Serengeti.fasta 2015.386301369863 0.013934052461390223 8.29688053184386E-4
RAB12002_15-06-2012_Pemba.fasta 2012.4535519125684 0.013595580361390225 0.001312547268640973
RAB12039_24-08-2011_Pemba.fasta 2011.6438356164383 0.013514018661390225 0.0014577507118389444
RV3229_05-01-2015_Serengeti.fasta 2015.0109589041097 0.013341213561390224 3.419657087009795E-4
RAB16024_21-09-2016_Pemba.fasta 2016.72131147541 0.012471291761390222 -0.0010069489775773061
RAB16027_07-10-2016_Pemba.fasta 2016.7650273224044 0.012556437261390224 -9.340463215846643E-4
RAB16029_05-10-2016_Pemba.fasta 2016.75956284153 0.012556400661390223 -9.325525660836761E-4
RAB16026_16-09-2016_Pemba.fasta 2016.707650273224 0.012550926461390223 -9.234883888249428E-4
RAB16028_04-10-2016_Pemba.fasta 2016.7568306010928 0.012717253061390222 -7.709349883331818E-4
RAB16025_21-09-2016_Pemba.fasta 2016.72131147541 0.013139543261390225 -3.38697477577303E-4
PM023_12-05-2017_Pemba.fasta 2017.358904109589 0.014289195661390223 6.323938811263734E-4
RAB16031_15-09-2016_Pemba.fasta 2016.704918032787 0.013581453261390224 1.0780358892544147E-4
RV2503_15-02-2009_Serengeti.fasta 2009.123287671233 0.011091054861390224 -2.5932089053143544E-4
RV2934_15-06-2007_Dodoma.fasta 2007.4520547945206 0.011068965261390222 1.866267274621622E-4
RV2767_12-09-2009_Serengeti.fasta 2009.695890410959 0.011323314961390224 -1.8742108325380848E-4
RV2784_28-02-2011_Nachingwea.fasta 2011.158904109589 0.011240281661390223 -6.801787675301419E-4
RV2778_15-12-2010_Pemba.fasta 2010.9534246575342 0.011747484261390223 -1.1543060794077555E-4
RV3116_07-05-2012_Serengeti.fasta 2012.3469945355191 0.011488544361390223 -7.646467990910684E-4
RV2862_11-05-2011_Serengeti.fasta 2011.3561643835617 0.011151393361390224 -8.243108047359202E-4
RV2772_02-08-2010_Kibaha.fasta 2010.5835616438355 0.011746446161390223 -1.2886700679870175E-5
SD641_05-04-2017_Serengeti.fasta 2017.2575342465752 0.011746446161390223 -0.001881966476142782
SUB7087_19-10-2001_Temeke.fasta 2001.7972602739726 0.012391202561390223 0.003092517827361828
RV2932_11-06-2007_Same.fasta 2007.441095890411 0.010159167861390223 -7.201015760263489E-4
RV2949_17-07-2009_Dodoma.fasta 2009.5397260273974 0.011266167461390223 -2.0083395796585864E-4
RV2813_29-04-2010_Morogoro.fasta 2010.323287671233 0.010879709961390222 -8.067318585333987E-4
RV2861_11-05-2011_Serengeti.fasta 2011.3561643835617 0.010412764561390224 -0.0015629396047359204
RV2811_24-04-2010_Morogoro.fasta 2010.309589041096 0.010085061461390224 -0.0015975439878940095
RV2777_15-12-2010_Pemba.fasta 2010.9534246575342 0.010321802761390223 -0.001541112107940775
RV2504_18-06-2003_Ngorongoro.fasta 2003.4602739726026 0.010539887861390224 7.754677317518173E-4
RV2783_28-02-2011_Newala.fasta 2011.158904109589 0.010537520161390222 -0.001382940267530143
RV2498_06-08-2008_Ulanga.fasta 2008.5956284153006 0.011598102138609777 3.9550002950981995E-4
RV2814_17-05-2010_Ulanga.fasta 2010.372602739726 0.011936182038609777 2.3592928438473902E-4
RV2815_27-09-2010_Kilombero.fasta 2010.7369863013698 0.011768716538609775 -3.358367462036847E-5
RV2816_28-09-2010_Kilombero.fasta 2010.7397260273972 0.011768716538609775 -3.435094874826815E-5
RV2499_05-08-2008_Ulanga.fasta 2008.5928961748634 0.011180638838609777 -2.1198092739685773E-5
RV2817_26-11-2010_Pemba.fasta 2010.9013698630138 0.011106670438609776 -7.416662222919056E-4
KX148205_1994_RWA 1994.5 0.007454420538609776 1.993704441320878E-4
LC029889_2009_UGA 2009.5 0.010971424961390223 -4.844509831119243E-4
SD706_2017_Serengeti.fasta 2017.5 0.013227758161390225 -4.6855823645829305E-4
SD709_08-09-2017_Serengeti.fasta 2017.6849315068494 0.012112544761390225 -0.0016355626400886905
SD714_14-04-2017_Serengeti.fasta 2017.282191780822 0.011718919761390225 -0.0019163983432935443
RV2773_26-10-2010_Kibaha.fasta 2010.8164383561643 0.011099355361390223 -7.251958015477896E-4
RV2483_28-09-2008_Serengeti.fasta 2008.74043715847 0.010964688561390223 -2.7846796848406477E-4
RV2500_23-11-2008_Serengeti.fasta 2008.8934426229507 0.011135948361390223 -1.5005812250976774E-4
RV2489_17-01-2009_Serengeti.fasta 2009.0438356164384 0.010885575861390225 -4.425489408234548E-4
RV2490_07-08-2008_Serengeti.fasta 2008.5983606557377 0.010885562761390223 -3.178045254601178E-4
RV2491_02-08-2008_Serengeti.fasta 2008.5846994535518 0.010801501061390224 -3.9804033670786526E-4
RV2493_31-07-2008_Serengeti.fasta 2008.5792349726776 0.010798850161390223 -3.991608812069884E-4
RV2485_28-09-2008_Serengeti.fasta 2008.74043715847 0.012598622461390223 0.0013554659315159357
RV3117_12-05-2012_Serengeti.fasta 2012.360655737705 0.009843039861390224 -0.0024139771878433185
RV2501_14-02-2004_Serengeti.fasta 2004.120218579235 0.010263924861390224 3.1468390754347403E-4
RV3128_16-06-2012_Serengeti.fasta 2012.4562841530055 0.010256816261390224 -0.0020269820091094112
SD670_11-04-2017_Serengeti.fasta 2017.2739726027398 0.012216454461390224 -0.0014165618209099565
RV2793_02-01-2011_Serengeti.fasta 2011.0027397260274 0.011787650861390223 -8.9074942242192E-5
RV2878_03-07-2011_Serengeti.fasta 2011.5013698630137 0.011623897261390225 -3.9247243351238185E-4
RV2885_24-07-2011_Serengeti.fasta 2011.558904109589 0.011708870361390225 -3.2361209019749794E-4
RV2887_25-07-2011_Serengeti.fasta 2011.5616438356165 0.011874329361390224 -1.5892036432528685E-4
RV2889_04-08-2011_Serengeti.fasta 2011.5890410958905 0.011537929661390224 -5.029928056039506E-4
RV2808_04-04-2010_Morogoro.fasta 2010.2547945205479 0.011618767161390224 -4.849280533690374E-5
RV2870_01-06-2011_Serengeti.fasta 2011.4136986301369 0.011450940861390225 -5.408760614209248E-4
RV2894_15-08-2011_Serengeti.fasta 2011.6191780821919 0.011705910261390224 -3.434522210104037E-4
RV2895_18-08-2011_Serengeti.fasta 2011.627397260274 0.011453830561390224 -5.978337433938802E-4
RV3051_13-10-2012_Serengeti.fasta 2012.7814207650274 0.012045697561390224 -3.2915686141416975E-4
RV3067_25-02-2013_Serengeti.fasta 2013.150684931507 0.012131330661390223 -3.4693805848323017E-4
RV3115_11-05-2012_Serengeti.fasta 2012.3579234972678 0.012049212761390224 -2.0703911009293564E-4
RV3119_17-05-2012_Serengeti.fasta 2012.3743169398906 0.011964558161390224 -2.962847765955699E-4
RV3110_30-04-2012_Serengeti.fasta 2012.327868852459 0.011877744161390223 -3.7009075483782766E-4
RV3150_24-03-2012_Serengeti.fasta 2012.2267759562842 0.011712281961390224 -5.072413780708562E-4
RV3134_19-07-2012_Serengeti.fasta 2012.5464480874316 0.011627519461390224 -6.815296748746251E-4
RV3137_21-07-2012_Serengeti.fasta 2012.551912568306 0.011708518461390224 -6.020610303755034E-4
RV3136_16-07-2012_Serengeti.fasta 2012.5382513661202 0.011787197861390224 -5.195557416232521E-4
RV2873_20-06-2011_Serengeti.fasta 2011.4657534246576 0.011368997361390224 -6.373977698502422E-4
RV2893_01-08-2011_Serengeti.fasta 2011.5808219178082 0.011368997361390224 -6.696232832203632E-4
RV2890_03-08-2011_Serengeti.fasta 2011.5863013698631 0.011456003761390224 -5.841514314760508E-4
RV2891_10-08-2011_Serengeti.fasta 2011.6054794520549 0.011456015861390225 -5.895102503710153E-4
RV3082_03-09-2013_Serengeti.fasta 2013.6712328767123 0.012043740161390223 -5.803106427762859E-4
RV2879_10-06-2011_Serengeti.fasta 2011.4383561643835 0.011366255861390223 -6.324665285716898E-4
RV2883_23-07-2011_Serengeti.fasta 2011.5561643835617 0.011533130561390223 -4.985846160695997E-4
RV3048_17-09-2012_Serengeti.fasta 2012.7103825136612 0.011701471161390224 -6.534886399021961E-4
RV3049_04-10-2012_Serengeti.fasta 2012.7568306010928 0.011701317861390224 -6.666499616600503E-4
RV3052_13-11-2012_Serengeti.fasta 2012.8661202185792 0.011875313561390224 -5.232613716783935E-4
RV3053_10-11-2012_Serengeti.fasta 2012.8579234972678 0.011875533161390225 -5.207462384270202E-4
RV3084_22-08-2013_Serengeti.fasta 2013.6383561643836 0.011788451461390225 -8.263920532419321E-4
RV3113_06-05-2012_Serengeti.fasta 2012.344262295082 0.011788967561390223 -4.6345842134057347E-4
RV3064_02-01-2013_Serengeti.fasta 2013.0027397260274 0.011698702861390223 -7.381330555787571E-4
RV3131_07-07-2012_Serengeti.fasta 2012.5136612021859 0.011867482761390224 -4.323842418691333E-4
RV3135_19-07-2012_Serengeti.fasta 2012.5464480874316 0.011867655661390223 -4.413934748746257E-4
RV2858_21-02-2011_Serengeti.fasta 2011.1397260273973 0.011608718061390223 -3.0637144863517735E-4
RV2906_09-09-2011_Serengeti.fasta 2011.6876712328767 0.011271730461390224 -7.968138742067855E-4
RV2867_22-05-2011_Serengeti.fasta 2011.386301369863 0.011358245961390224 -6.258982201423728E-4
RV2882_23-07-2011_Serengeti.fasta 2011.5561643835617 0.011359209461390223 -6.725057160695998E-4
RV2892_12-08-2011_Serengeti.fasta 2011.6109589041096 0.011360626461390223 -6.86434198626705E-4
RV3114_06-05-2012_Serengeti.fasta 2012.344262295082 0.011189791161390223 -0.0010626348213405735
RV3066_22-02-2013_Serengeti.fasta 2013.1424657534246 0.011944862061390223 -5.311048360995309E-4
RV3111_29-04-2012_Serengeti.fasta 2012.3251366120219 0.011693474561390225 -5.535951770873314E-4
RV2789_22-10-2010_Serengeti.fasta 2010.805479452055 0.012849221661390223 0.0010277395949635868
RV2794_12-01-2011_Serengeti.fasta 2011.0301369863014 0.012464508561390223 5.801100164792555E-4
RV2810_23-04-2010_Morogoro.fasta 2010.3068493150686 0.012559091761390223 8.772535862337782E-4
RV2896_19-08-2011_Serengeti.fasta 2011.6301369863013 0.012559119061390223 5.066874824782193E-4
RV2792_07-01-2011_Serengeti.fasta 2011.0164383561644 0.012296562861390224 4.160006871185319E-4
RV2799_29-01-2011_Serengeti.fasta 2011.0767123287671 0.012345010161390224 4.4756795630562785E-4
RV3075_31-01-2013_Serengeti.fasta 2013.0821917808219 0.012892500061390224 4.334131947132634E-4
SD645_30-12-2016_Serengeti.fasta 2016.9945355191257 0.012891897161390223 -6.628613526232195E-4
SD678_06-10-2016_Serengeti.fasta 2016.7622950819673 0.012725444861390224 -7.642735438341697E-4
RV2786_20-06-2010_Serengeti.fasta 2010.4657534246576 0.012045192861390224 3.1885278681804095E-4
RV2797_30-01-2011_Serengeti.fasta 2011.0794520547945 0.012135242561390223 2.370330821777275E-4
RV2798_31-01-2011_Serengeti.fasta 2011.0821917808219 0.012134973561390225 2.3599680804993993E-4
RV3123_26-04-2012_Serengeti.fasta 2012.3169398907103 0.012559076861390224 3.1430265616404045E-4
RV3132_02-04-2012_Serengeti.fasta 2012.2513661202186 0.013315939461390225 0.001089529522175026
RV3129_25-06-2012_Serengeti.fasta 2012.48087431694 0.012558701861390223 2.6801699113646917E-4
RV3130_28-06-2012_Serengeti.fasta 2012.4890710382513 0.012558701861390223 2.6572145788509617E-4
RV3145_08-08-2012_Serengeti.fasta 2012.6010928961748 0.012469582061390224 1.45229370116148E-4
RV2909_12-11-2011_Serengeti.fasta 2011.86301369863 0.012472372261390224 3.547223816103007E-4
RV3050_02-09-2012_Serengeti.fasta 2012.6693989071039 0.012725439461390224 3.8195732635466946E-4
RV3070_27-02-2013_Serengeti.fasta 2013.1561643835616 0.012893849061390223 4.1404579326108186E-4
RV3138_16-07-2012_Serengeti.fasta 2012.5382513661202 0.012556929961390224 2.5017635837674794E-4
RV3088_25-04-2013_Serengeti.fasta 2013.3123287671233 0.012216148361390223 -3.0738953202675764E-4
RV2796_19-01-2011_Serengeti.fasta 2011.0493150684931 0.012380670161390224 4.909006975841804E-4
RV2859_01-03-2011_Serengeti.fasta 2011.1616438356164 0.012383191161390224 4.6196345834207016E-4
RV2868_06-06-2011_Serengeti.fasta 2011.427397260274 0.012383152661390224 3.874993679397979E-4
RV2880_02-07-2011_Serengeti.fasta 2011.4986301369863 0.012301528161390223 2.859257406154052E-4
RV2897_02-09-2011_Serengeti.fasta 2011.668493150685 0.012301528161390223 2.3835474468817883E-4
RV2888_29-07-2011_Serengeti.fasta 2011.572602739726 0.012292885461390225 2.5656663916322556E-4
RV3073_18-02-2013_Serengeti.fasta 2013.131506849315 0.012716554661390224 2.4365686041184602E-4
RV3085_06-09-2013_Serengeti.fasta 2013.6794520547944 0.012798248561390224 1.7189593484023824E-4
RV2866_15-04-2011_Serengeti.fasta 2011.2849315068493 0.014086401061390223 0.00213064602258836
RV2900_28-09-2011_Serengeti.fasta 2011.7397260273972 0.012722400661390224 6.392781173638982E-4
RV2903_05-10-2011_Serengeti.fasta 2011.7589041095891 0.012640855761390225 5.523622984688233E-4
RV3103_10-12-2011_Serengeti.fasta 2011.9397260273972 0.012306152761390224 1.6701920603021982E-4
RV3104_22-12-2011_Serengeti.fasta 2011.972602739726 0.012387734361390224 2.3939351649597887E-4
RV3151_03-01-2012_Serengeti.fasta 2012.0054644808743 0.012385269461390224 2.2772551971643636E-4
RV3078_26-05-2013_Serengeti.fasta 2013.3972602739725 0.013573340661390224 0.0010260172700095743
SD577_30-09-2015_Serengeti.fasta 2015.7452054794521 0.014212473061390223 0.0010075957424349677
SD577sg_30-09-2015_Serengeti.fasta 2015.7452054794521 0.014211571561390223 0.0010066942424349686
RV3092_16-12-2011_Serengeti.fasta 2011.9561643835616 0.013147945961390224 0.0010042087612630434
RV3093_22-12-2011_Serengeti.fasta 2011.972602739726 0.012981098361390223 8.327575164959779E-4
RV3105_22-03-2012_Serengeti.fasta 2012.22131147541 0.012979565361390224 7.615723774300216E-4
RV3107_09-04-2012_Serengeti.fasta 2012.2704918032787 0.012558698861390223 3.269326779217832E-4
RV3109_12-04-2012_Serengeti.fasta 2012.27868852459 0.012727829061390224 4.937673446705221E-4
RV3122_30-03-2012_Serengeti.fasta 2012.2431693989072 0.012645706261390223 4.2159185542639706E-4
RV3124_07-05-2012_Serengeti.fasta 2012.3469945355191 0.012645446661390225 3.9225550090893346E-4
PM015_09-11-2016_Pemba.fasta 2016.8551912568305 0.016069083461390223 0.0025533490126502315
PM024_14-05-2017_Pemba.fasta 2017.3643835616438 0.017632507661390222 0.0039741713328706844
RAB16033_07-10-2016_Pemba.fasta 2016.7650273224044 0.017778369061390225 0.004287885478415337
PM019_05-02-2017_Pemba.fasta 2017.0958904109589 0.015686609761390222 0.0021034662974008557
PM018_17-02-2017_Pemba.fasta 2017.1287671232876 0.014293661961390224 7.013112078665049E-4
SD681_08-09-2017_Serengeti.fasta 2017.6849315068494 0.013410650561390224 -3.374568400886912E-4
SD635_07-06-2016_Serengeti.fasta 2016.431693989071 0.013424266761390224 2.7134863971578146E-5
SD643_14-05-2017_Serengeti.fasta 2017.3643835616438 0.013763869261390223 1.0553293287068541E-4
SD620_20-02-2016_Serengeti.fasta 2016.136612021858 0.015898696161390224 0.0025842034610211173
SD622_15-02-2016_Serengeti.fasta 2016.122950819672 0.014036261161390224 7.255943497734788E-4
SUB7101_24-09-2015_Serengeti.fasta 2015.7287671232878 0.013763655061390224 5.633813872021453E-4
SD647_18-08-2016_Serengeti.fasta 2016.6284153005465 0.013681989461390225 2.2976476593840507E-4
SD601_17-12-2015_Serengeti.fasta 2015.958904109589 0.013940487161390224 6.757624604620139E-4
SD648_31-03-2017_Serengeti.fasta 2017.2438356164384 0.013830207761390224 2.0563149449638433E-4
RAB12005_09-05-2012_Pemba.fasta 2012.3524590163934 0.013765980861390224 0.0015112593454080538