#Deprecated - Pls use the new Rivuletpy library https://github.com/RivuletStudio/rivuletpy
Rivulet is a Matlab GUI App for automatic reconstruction of single neuron cells. It is capable of automatic filternig 3D microscopic image stacks, segmenting neuron structures, reconstructing soma surface and neuron tracing. It has direct communication between the GUI interface and the Matlab workspace. It is currently actively being maintained and updated.
Please cite the following paper for research use of Rivulet:
*Siqi Liu, Donghao Zhang, Sidong Liu, Dagan Feng, Hanchuan Peng, Weidong Cai, "Rivulet: 3D Neuron Morphology Tracing with Iterative Back-Tracking", Neuroinformatics, 2016.
Donghao Zhang, Siqi Liu, Sidong Liu, Dagan Feng, Hanchuan Peng, Weidong Cai, "Sub-Voxel Reconstruction of 3D Neuron Morphology using RIVULET Back-Tracking", The IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI 2016), 2016.
For details, please refer to our WIKI Rivulet wiki