Workflow Run Crate profiles 0.5.0

What's Changed

• Add DeepHealth tissue/tumor prediction pipeline example by @simleo in #2
• Update prediction pipeline example by @simleo in #3
• Generate crate from CWLProv by @simleo in #5
• Requirements review by @simleo in #6
• CWLProv converter: param info from workflow file by @simleo in #7
• Link step to tool with workExample by @simleo in #8
• Update requirements table by @simleo in #19
• Add position property to steps by @simleo in #20
• cwlprov_to_crate: support Directory inputs / outputs by @simleo in #21
• Support runs with no outputs and file arrays by @simleo in #23
• Rebuild cwlprov_to_crate on top of cwlprov-py by @simleo in #26
• Restore link from root dataset to workflow run via mentions by @simleo in #27
• cwlprov_to_crate: support for subworkflows by @simleo in #28
• Add profile draft by @simleo in #31
• Change modeling of parameter connections by @simleo in #29
• Fix parameter connections by @simleo in #34
• Add section on parameter connections by @simleo in #35
• Added ml-predict-pipeline-streamflow by @GlassOfWhiskey in #37
• Add ML predict pipeline crate obtained with cwltool and runcrate by @simleo in #38
• Profiles: specify how to represent configuration files by @simleo in #39
• Add conformsTo to identify profile conformance by @stain in #40
• Add section on representing multi-file objects by @simleo in #41
• Add recommendations for software version by @simleo in #42
• Updated ml-predict-pipeline-streamflow by @GlassOfWhiskey in #45
• Remove consume_crate by @simleo in #46
• Clarify relationship with Bioschemas FormalParameter by @simleo in #47
• Provenance Run Crate: clarify tool representation by @simleo in #48
• Add specs on action status by @simleo in #50
• Add recommendation on adding workflow traces by @simleo in #49
• COMPSs BackTrackBB WRROC example by @rsirvent in #43
• 0.1 Release by @simleo in #51
• Update cwltool-runcrate version of the predict pipeline crate by @simleo in #52
• Update examples generated by runcrate by @simleo in #54
• Review conformsTo in COMPSs example by @simleo in #56
• Example Galaxy Workflowrun ro-crate by @pauldg in #44
• Update Workflow Run Crate profile by @simleo in #55
• 0.2 Release by @simleo in #57
• Updated ml-predict-pipeline-streamflow by @GlassOfWhiskey in #58
• Add / update ER diagrams by @simleo in #59
• Adding RO-Crate for the Autosubmit workflow that uses mHM and their test data domains by @kinow in #61
• Guidelines on representing environment variables by @simleo in #63
• Add spec to describe container images by @simleo in #64
• 0.3 Release by @simleo in #65
• Added initial WfExS-backend examples based on toy workflow. by @jmfernandez in #53
• Add CRCC img convert crate by @simleo in #66
• Add spec on software dependencies by @simleo in #67
• Release 0.4 by @simleo in #68
• Add section on conditional execution by @simleo in #70
• Resource usage example by @simleo in #60
• Spec to represent resource usage by @simleo in #71
• Add Profile Crates for 0.5-DRAFT by @stain in #73
• Move files under docs/ontology by @simleo in #74
• Add SPARQL layout and first queries by @simleo in #76
• Add SPARQL query for CQ3 by @simleo in #77
• Add SPARQL queries for CQ7, CQ8, CQ9 by @simleo in #78
• Add resourceUsage to the profile crate by @simleo in #75
• Fix 0.5-DRAFT links by @simleo in #80
• Reference environment files using buildInstructions by @stain in #79

New Contributors

• @simleo made their first contribution in #2
• @GlassOfWhiskey made their first contribution in #37
• @stain made their first contribution in #40
• @rsirvent made their first contribution in #43
• @pauldg made their first contribution in #44
• @kinow made their first contribution in #61
• @jmfernandez made their first contribution in #53

Full Changelog: https://github.com/ResearchObject/workflow-run-crate/commits/0.5.0