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Copy pathDraw Images from Connection Matrix.py
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Draw Images from Connection Matrix.py
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import matplotlib.pyplot as plt
import matplotlib.cm as cm
import numpy as np
import seaborn as sns
import os
def draw_image(filename):
individual = filename.split('.')[0] + 'png'
input_file = 'C:/Users/HP/Desktop/Cheminformatics Datasets/CDK2_all-actives_tables 2/' + filename
output_file = 'C:/Users/HP/Desktop/Cheminformatics Datasets/Output Folder/' + individual
myArray = np.loadtxt(input_file)
ax = sns.heatmap(myArray, square=True, xticklabels=False, yticklabels=False, cbar=False, linewidths=.8, linecolor='lightgray', cmap='gray_r')
figure = ax.get_figure()
figure.savefig(output_file, dpi=400)
directory_in_str = 'C:/Users/HP/Desktop/Cheminformatics Datasets/CDK2_all-actives_tables 2'
directory = os.fsencode(directory_in_str)
outfolder = 'C:/Users/HP/Desktop/Cheminformatics Datasets/Output Folder/'
def iterate:
for file in os.listdir(directory):
filename = os.fsdecode(file)
if filename.endswith(".txt"):
# print(os.path.join(directory, filename))
Individual_file = filename.split('.')[0]
#print(Individual_file)
draw_image(filename)
outfile = outfolder + filename.split('.')[0] + '.jpg'
##Image.save(outfile)
else:
print("File not available")
continue
if __name__ == "__main__":
iterate()