diff --git a/api/Dockerfile b/api/Dockerfile
index d8a7130a..2cbc6138 100644
--- a/api/Dockerfile
+++ b/api/Dockerfile
@@ -1,4 +1,4 @@
-FROM node:16
+FROM node:13.14.0
RUN apt-get update && apt-get install -y nano tree tzdata
diff --git a/api/controllers/ctsas.js b/api/controllers/ctsas.js
index cc0fae25..6d1f5708 100644
--- a/api/controllers/ctsas.js
+++ b/api/controllers/ctsas.js
@@ -1,5 +1,4 @@
const db = require('../config/database')
-const {ParameterizedQuery: PQ} = require("pg-promise");
exports.list = (req, res) => {
const query = `SELECT * FROM "CTSAs";`
@@ -19,42 +18,3 @@ exports.list = (req, res) => {
})
}
-
-
-exports.removeCTSA = (req, res) => {
- const body = req.body
- const ctsaId = body.ctsaId
- const move1 = new PQ({
- text: `INSERT into removeditems (created, tablename, item)
- SELECT current_timestamp, 'CTSAs', to_jsonb(rows) FROM
- (select * from "CTSAs" as ss where ss."ctsaId"=$1) rows;`,
- values: [ctsaId]
- })
-
- const del1 = new PQ({
- text: `DELETE from "CTSAs" as t where t."ctsaId" = $1;`,
- values: [ctsaId]
- })
-
- let sites = 0
-
- let q = db.any(new PQ({text: 'SELECT COUNT("ctsaId") FROM "Sites" where "ctsaId"=$1;', values:[body.ctsaId]}))
- .then(data => sites = +data[0].count)
- .then(d => {
- if(sites < 1) {
- db.any(move1)
- .then(r=> db.any(del1)
- .then(r => res.status(200).send('OK')))
- }
- else {
- res.status(200).send('NOT REMOVED')
- }
- })
- .catch(error => {
- console.log('ERROR:', error)
- res.status(500).send('There was an error fetching data.')
- })
-
-}
-
-
diff --git a/api/controllers/sites.js b/api/controllers/sites.js
index b7ff0fa0..babe9400 100644
--- a/api/controllers/sites.js
+++ b/api/controllers/sites.js
@@ -1,5 +1,4 @@
const db = require('../config/database')
-const {ParameterizedQuery: PQ} = require('pg-promise');
exports.list = (req, res) => {
const query = `SELECT * FROM "Sites";`
@@ -19,45 +18,3 @@ exports.list = (req, res) => {
res.status(500).send('There was an error fetching data.')
})
}
-
-exports.removeSite = (req, res) => {
- const body = req.body
- let paramaters = [body.ctsaId, body.siteId, body.siteName];
-
- const move1 = new PQ({
- text: `INSERT into removeditems (created, tablename, item)
- SELECT current_timestamp, 'StudySites', to_jsonb(rows) FROM
- (select * from "StudySites" as ss where ss."ctsaId"=$1 and ss."siteId"=$2 and ss."siteName"=$3) rows;`,
- values: paramaters
- })
-
- const move2 = new PQ({
- text: `INSERT into removeditems (created, tablename, item)
- SELECT current_timestamp, 'Sites', to_jsonb(rows) FROM
- (select * from "Sites" as s where s."ctsaId"=$1 and s."siteId"=$2 and s."siteName"=$3) rows;`,
- values: paramaters
- })
-
- const del1 = new PQ({
- text: `DELETE from "StudySites" as ss where ss."ctsaId" = $1 and ss."siteId"=$2 and ss."siteName"=$3;`,
- values: paramaters
- })
-
- const del2 = new PQ({
- text: `DELETE from "Sites" as s where s."ctsaId" = $1 and s."siteId"=$2 and s."siteName"=$3;`,
- values: paramaters
- })
-
- const r = db.any(move1)
- .then(r => db.any(move2)
- .then(r=> db.any(del1))
- .then(r=> db.any(del2)
- .then(r => res.status(200).send('OK'))))
- .catch(error => {
- console.log('ERROR:', error)
- res.status(500).send('There was an error fetching data.')
- })
- Promise.all([r])
-}
-
-
diff --git a/api/package-lock.json b/api/package-lock.json
new file mode 100644
index 00000000..930f2de2
--- /dev/null
+++ b/api/package-lock.json
@@ -0,0 +1,2689 @@
+{
+ "name": "api",
+ "version": "1.0.0",
+ "lockfileVersion": 1,
+ "requires": true,
+ "dependencies": {
+ "@coolaj86/urequest": {
+ "version": "1.3.7",
+ "resolved": "https://registry.npmjs.org/@coolaj86/urequest/-/urequest-1.3.7.tgz",
+ "integrity": "sha512-PPrVYra9aWvZjSCKl/x1pJ9ZpXda1652oJrPBYy5rQumJJMkmTBN3ux+sK2xAUwVvv2wnewDlaQaHLxLwSHnIA=="
+ },
+ "@sindresorhus/is": {
+ "version": "0.14.0",
+ "resolved": "https://registry.npmjs.org/@sindresorhus/is/-/is-0.14.0.tgz",
+ "integrity": "sha512-9NET910DNaIPngYnLLPeg+Ogzqsi9uM4mSboU5y6p8S5DzMTVEsJZrawi+BoDNUVBa2DhJqQYUFvMDfgU062LQ==",
+ "dev": true
+ },
+ "@szmarczak/http-timer": {
+ "version": "1.1.2",
+ "resolved": "https://registry.npmjs.org/@szmarczak/http-timer/-/http-timer-1.1.2.tgz",
+ "integrity": "sha512-XIB2XbzHTN6ieIjfIMV9hlVcfPU26s2vafYWQcZHWXHOxiaRZYEDKEwdl129Zyg50+foYV2jCgtrqSA6qNuNSA==",
+ "dev": true,
+ "requires": {
+ "defer-to-connect": "^1.0.1"
+ }
+ },
+ "@types/color-name": {
+ "version": "1.1.1",
+ "resolved": "https://registry.npmjs.org/@types/color-name/-/color-name-1.1.1.tgz",
+ "integrity": "sha512-rr+OQyAjxze7GgWrSaJwydHStIhHq2lvY3BOC2Mj7KnzI7XK0Uw1TOOdI9lDoajEbSWLiYgoo4f1R51erQfhPQ==",
+ "dev": true
+ },
+ "abab": {
+ "version": "1.0.4",
+ "resolved": "https://registry.npmjs.org/abab/-/abab-1.0.4.tgz",
+ "integrity": "sha1-X6rZwsB/YN12dw9xzwJbYqY8/U4="
+ },
+ "abbrev": {
+ "version": "1.1.1",
+ "resolved": "https://registry.npmjs.org/abbrev/-/abbrev-1.1.1.tgz",
+ "integrity": "sha512-nne9/IiQ/hzIhY6pdDnbBtz7DjPTKrY00P/zvPSm5pOFkl6xuGrGnXn/VtTNNfNtAfZ9/1RtehkszU9qcTii0Q==",
+ "dev": true
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+ "accepts": {
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+ "resolved": "https://registry.npmjs.org/accepts/-/accepts-1.3.8.tgz",
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+ "requires": {
+ "mime-types": "~2.1.34",
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+ "requires": {
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+ }
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+ "acorn": {
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+ "resolved": "https://registry.npmjs.org/acorn/-/acorn-4.0.13.tgz",
+ "integrity": "sha1-EFSVrlNh1pe9GVyCUZLhrX8lN4c="
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+ "latest-version": "^5.0.0",
+ "pupa": "^2.0.1",
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+ }
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+ "resolved": "https://registry.npmjs.org/url-parse-lax/-/url-parse-lax-3.0.0.tgz",
+ "integrity": "sha1-FrXK/Afb42dsGxmZF3gj1lA6yww=",
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+ "resolved": "https://registry.npmjs.org/util-deprecate/-/util-deprecate-1.0.2.tgz",
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+}
diff --git a/api/package.json b/api/package.json
index 9bb62d4e..5f969e41 100644
--- a/api/package.json
+++ b/api/package.json
@@ -11,19 +11,19 @@
"author": "",
"license": "ISC",
"dependencies": {
- "axios": "1.2.2",
- "cookie-session": "2.0.0",
+ "axios": "^0.21.1",
+ "cookie-session": "^1.4.0",
"cors": "^2.8.5",
"csv-parser": "^2.3.3",
"d3": "^5.16.0",
"d3-node": "^2.2.2",
- "express": "5.0.0-beta.1",
- "express-session": "1.17.3",
- "multer": "1.4.5-lts.1",
- "pg-promise": "11.0.2",
+ "express": "^4.17.1",
+ "express-session": "^1.17.1",
+ "multer": "^1.4.2",
+ "pg-promise": "^10.15.4",
"ssl-root-cas": "^1.3.1"
},
"devDependencies": {
- "nodemon": "2.0.20"
+ "nodemon": "^2.0.4"
}
}
diff --git a/api/routes/ctsas.js b/api/routes/ctsas.js
index 2a14789e..c9e25bc9 100644
--- a/api/routes/ctsas.js
+++ b/api/routes/ctsas.js
@@ -5,6 +5,5 @@ const ctsasController = require('../controllers/ctsas')
// Routes beginning with "HOSTNAME/ctsas/..."
router.route('/').get(ctsasController.list)
-router.route('/').delete(ctsasController.removeCTSA)
module.exports = router
\ No newline at end of file
diff --git a/api/routes/sites.js b/api/routes/sites.js
index 0773f3bd..45c0f287 100644
--- a/api/routes/sites.js
+++ b/api/routes/sites.js
@@ -5,7 +5,8 @@ const sitesController = require('../controllers/sites')
// Routes beginning with "HOSTNAME/sites/..."
router.route('/').get(sitesController.list)
-router.route('/').delete(sitesController.removeSite)
-
+// router.route('/reports').post(sitesController.addReport)
+// router.route('/').post(sitesController.uploadSites)
+// router.route('/metrics').get(sitesController.metrics)
module.exports = router
\ No newline at end of file
diff --git a/db/Dockerfile b/db/Dockerfile
index 4f72322f..3328d8d8 100644
--- a/db/Dockerfile
+++ b/db/Dockerfile
@@ -1 +1 @@
-FROM postgres:15.1
+FROM postgres:11.2
diff --git a/frontend/Dockerfile-prod b/frontend/Dockerfile-prod
index 8246bd8b..84f0010d 100644
--- a/frontend/Dockerfile-prod
+++ b/frontend/Dockerfile-prod
@@ -1,6 +1,6 @@
# Build environment
###################
-FROM node:16-alpine AS builder
+FROM node:10.12.0-alpine AS builder
# Create and set working directory
RUN mkdir /src
diff --git a/frontend/src/components/Footer/Footer.js b/frontend/src/components/Footer/Footer.js
index 627c91b6..ffab44e4 100644
--- a/frontend/src/components/Footer/Footer.js
+++ b/frontend/src/components/Footer/Footer.js
@@ -15,7 +15,7 @@ export const Footer = props => {
return (
)
diff --git a/frontend/src/components/Tables/LookupTable.js b/frontend/src/components/Tables/LookupTable.js
index 456324f8..c9bcc643 100644
--- a/frontend/src/components/Tables/LookupTable.js
+++ b/frontend/src/components/Tables/LookupTable.js
@@ -1,10 +1,5 @@
import React from 'react'
import MaterialTable from 'material-table'
-import {IconButton} from "@material-ui/core";
-import axios from "axios";
-import api from "../../Api";
-import RemoveCircleIcon from "@material-ui/icons/RemoveCircle";
-
export const LookupTable = ({ title, data }) => {
const now = new Date()
@@ -13,7 +8,6 @@ export const LookupTable = ({ title, data }) => {
columns={ [
{ title: 'ID', field: 'id', },
{ title: 'Name', field: 'name', },
- { title: 'Action', hidden: true, render: RemoveBtn },
] }
data={ data }
options={{
@@ -30,28 +24,3 @@ export const LookupTable = ({ title, data }) => {
/>
)
}
-
-export const RemoveBtn = row => {
- return(
- {
- if (data.data === "OK")
- window.alert("Item has been removed. Refresh the page to see the change.")
- else
- window.alert("Item cannot be removed.")
- })
-
- .catch(error => console.error(error))
- }
-
- }}>
-
-
- )
-}
\ No newline at end of file
diff --git a/frontend/src/components/Tables/SitesEnrollmentTable.js b/frontend/src/components/Tables/SitesEnrollmentTable.js
index 0eb00b40..ae5e5a3c 100644
--- a/frontend/src/components/Tables/SitesEnrollmentTable.js
+++ b/frontend/src/components/Tables/SitesEnrollmentTable.js
@@ -1,11 +1,6 @@
import React from 'react'
import MaterialTable from 'material-table'
import { EnrollmentBar } from '../Widgets/EnrollmentBar'
-import {IconButton} from "@material-ui/core";
-import RemoveCircleIcon from '@material-ui/icons/RemoveCircle';
-import axios from "axios";
-import api from "../../Api";
-
export const SitesEnrollmentTable = props => {
const title = 'SitesEnrollment'
@@ -36,9 +31,7 @@ export const SitesEnrollmentTable = props => {
)
}
-
return (
-
{
{ title: 'Enrolled', field: 'enrolled', type: 'numeric'},
{ title: 'Expected', field: 'expected', type: 'numeric' },
{ title: 'Percent Enrolled (%)', field: 'percentEnrolled', type: 'numeric' },
- { title: 'CTSA ID', field: 'ctsaId'},
- { title: 'Action', hidden: true, render: RemoveBtn },
-
+ { title: 'CTSA ID', field: 'ctsaId'}
] }
data={ props.data }
options={{
@@ -64,34 +55,6 @@ export const SitesEnrollmentTable = props => {
// pageSizeOptions: [15, 25, 50, 100, 200],
exportFileName: `${ title }__${ now.toISOString() }`,
}}
-
/>
-
)
}
-
-export const RemoveBtn = row => {
- return(
- window.alert("Item has been removed. Refresh the page to see the change."))
- .catch(error => console.error(error))
- }
-
- }}>
-
-
- )
-}
\ No newline at end of file
diff --git a/frontend/src/components/Tables/SitesTable.js b/frontend/src/components/Tables/SitesTable.js
index 5adfc9a3..9800938c 100644
--- a/frontend/src/components/Tables/SitesTable.js
+++ b/frontend/src/components/Tables/SitesTable.js
@@ -3,7 +3,6 @@ import MaterialTable from 'material-table'
import { StoreContext } from '../../contexts/StoreContext'
import { SiteDetailPanel, dayCount, displayRatio } from './DetailPanels'
import { EnrollmentBar } from '../Widgets/EnrollmentBar'
-import { RemoveBtn } from './SitesEnrollmentTable'
const invalidDisplay = 'N/A'
@@ -66,7 +65,6 @@ export const SitesTable = props => {
}
return (
-
{
render: row => row.queriesPerConsentedPatient,
hidden: true,
},
- { title: 'Action', hidden: true, render: RemoveBtn },
]
}
data={ sites }
@@ -127,6 +124,5 @@ export const SitesTable = props => {
detailPanel={rowData => }
onRowClick={(event, rowData, togglePanel) => togglePanel()}
/>
-
)
}
diff --git a/frontend/src/views/Ctsas.js b/frontend/src/views/Ctsas.js
index 2f90aebf..c044957d 100644
--- a/frontend/src/views/Ctsas.js
+++ b/frontend/src/views/Ctsas.js
@@ -38,9 +38,7 @@ export const CtsasPage = (props) => {
{ctsas ? (
-
- ({ id: ctsa.ctsaId, name: ctsa.ctsaName }))} />
-
+ ({ id: ctsa.ctsaId, name: ctsa.ctsaName }))} />
) : (
)}
diff --git a/frontend/src/views/Sites.js b/frontend/src/views/Sites.js
index 4f85166d..b73a44d1 100644
--- a/frontend/src/views/Sites.js
+++ b/frontend/src/views/Sites.js
@@ -68,7 +68,6 @@ export const SitesPage = (props) => {
id: site.siteId,
name: studySite.siteName,
studyName: studyNames[studySite.ProposalID],
- proposalID: studySite.ProposalID,
enrolled: enrolled,
expected: expected,
percentEnrolled: percent,