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updated conda env dir
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@PetervanLunteren
PetervanLunteren authored Jan 20, 2025
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62 changes: 31 additions & 31 deletions install_files/linux/install.command
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Expand Up @@ -173,24 +173,24 @@ $conda_exe install mamba -n base -c conda-forge -y
conda_exe="${LOCATION_ECOASSIST_FILES}/miniforge/bin/mamba"

### install env-base
$conda_exe env create --file="${LOCATION_ECOASSIST_FILES}/cameratraps/envs/environment-detector.yml" -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" -y
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install RangeSlider
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install gpsphoto
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install exifread
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install piexif
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install openpyxl
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install customtkinter
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install CTkTable
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install folium
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install plotly
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install "gitpython>=3.1.30"
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install "tensorboard>=2.4.1"
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install "thop>=0.1.1"
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install "protobuf<=3.20.1"
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install "setuptools>=65.5.1"
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install PySide6
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-base" pip install "lxml==4.6.3"
"${LOCATION_ECOASSIST_FILES}/envs/env-base/bin/pyside6-rcc" -o "${LOCATION_ECOASSIST_FILES}/Human-in-the-loop/libs/resources.py" "${LOCATION_ECOASSIST_FILES}/Human-in-the-loop/resources.qrc"
$conda_exe env create --file="${LOCATION_ECOASSIST_FILES}/cameratraps/envs/environment-detector.yml" -p "${CONDA_DIR}/envs/env-base" -y
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install RangeSlider
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install gpsphoto
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install exifread
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install piexif
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install openpyxl
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install customtkinter
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install CTkTable
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install folium
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install plotly
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install "gitpython>=3.1.30"
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install "tensorboard>=2.4.1"
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install "thop>=0.1.1"
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install "protobuf<=3.20.1"
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install "setuptools>=65.5.1"
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install PySide6
$conda_exe run -p "${CONDA_DIR}/envs/env-base" pip install "lxml==4.6.3"
"${CONDA_DIR}/envs/env-base/bin/pyside6-rcc" -o "${LOCATION_ECOASSIST_FILES}/Human-in-the-loop/libs/resources.py" "${LOCATION_ECOASSIST_FILES}/Human-in-the-loop/resources.qrc"

# requirements for Human-in-the-loop
echo "We need to install libxcb-cursor-dev (https://packages.debian.org/sid/libxcb-cursor-dev) and libxcb-cursor0 (https://packages.debian.org/sid/libxcb-cursor0). If you don't have root privileges you might be prompted for a password. Press CONTROL+D to skip authentication and not install these packages. EcoAssist will still work fine without it but you might have problems with the Human-in-the-loop software."
Expand All @@ -207,23 +207,23 @@ echo "We need to install libxcb-cursor-dev (https://packages.debian.org/sid/libx
}

### install env-tensorflow
$conda_exe env create --file="${LOCATION_ECOASSIST_FILES}/EcoAssist/classification_utils/envs/tensorflow-linux-windows.yml" -p "${LOCATION_ECOASSIST_FILES}/envs/env-tensorflow" -y
$conda_exe env create --file="${LOCATION_ECOASSIST_FILES}/EcoAssist/classification_utils/envs/tensorflow-linux-windows.yml" -p "${CONDA_DIR}/envs/env-tensorflow" -y

### install env-pytorch
$conda_exe create -p "${LOCATION_ECOASSIST_FILES}/envs/env-pytorch" python=3.8 -y
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-pytorch" pip install torch==2.0.1 torchvision==0.15.2
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-pytorch" pip install "ultralytics==8.0.191"
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-pytorch" pip install "numpy==1.24.1"
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-pytorch" pip install "humanfriendly==10.0"
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-pytorch" pip install "jsonpickle==3.0.2"
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-pytorch" pip install timm
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-pytorch" pip install dill
$conda_exe create -p "${CONDA_DIR}/envs/env-pytorch" python=3.8 -y
$conda_exe run -p "${CONDA_DIR}/envs/env-pytorch" pip install torch==2.0.1 torchvision==0.15.2
$conda_exe run -p "${CONDA_DIR}/envs/env-pytorch" pip install "ultralytics==8.0.191"
$conda_exe run -p "${CONDA_DIR}/envs/env-pytorch" pip install "numpy==1.24.1"
$conda_exe run -p "${CONDA_DIR}/envs/env-pytorch" pip install "humanfriendly==10.0"
$conda_exe run -p "${CONDA_DIR}/envs/env-pytorch" pip install "jsonpickle==3.0.2"
$conda_exe run -p "${CONDA_DIR}/envs/env-pytorch" pip install timm
$conda_exe run -p "${CONDA_DIR}/envs/env-pytorch" pip install dill

### install env-pywildlife
$conda_exe create -p "${LOCATION_ECOASSIST_FILES}/envs/env-pywildlife" python=3.8 -y
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-pywildlife" pip install pytorchwildlife
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-pywildlife" pip install "setuptools<70"
$conda_exe run -p "${LOCATION_ECOASSIST_FILES}/envs/env-pywildlife" pip install jsonpickle
$conda_exe create -p "${CONDA_DIR}/envs/env-pywildlife" python=3.8 -y
$conda_exe run -p "${CONDA_DIR}/envs/env-pywildlife" pip install pytorchwildlife
$conda_exe run -p "${CONDA_DIR}/envs/env-pywildlife" pip install "setuptools<70"
$conda_exe run -p "${CONDA_DIR}/envs/env-pywildlife" pip install jsonpickle

### clean
$conda_exe clean --all --yes --force-pkgs-dirs
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