Added NMTv2.0

Also fixed a typo
PRIME-RE · May 1, 2020 · ba4ceb2 · ba4ceb2
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Showing 126 changed files with 10 additions and 47 deletions.
diff --git a/images/all_warp_pairs/Composite_D99_on_NMTv2.0_acpc_asym.png b/images/all_warp_pairs/Composite_D99_on_NMTv2.0_acpc_asym.png
diff --git a/images/all_warp_pairs/Composite_D99_on_NMTv2.0_acpc_sym.png b/images/all_warp_pairs/Composite_D99_on_NMTv2.0_acpc_sym.png
diff --git a/images/all_warp_pairs/Composite_D99_on_NMTv2.0_stereo_asym.png b/images/all_warp_pairs/Composite_D99_on_NMTv2.0_stereo_asym.png
diff --git a/images/all_warp_pairs/Composite_D99_on_NMTv2.0_stereo_sym.png b/images/all_warp_pairs/Composite_D99_on_NMTv2.0_stereo_sym.png
diff --git a/images/all_warp_pairs/Composite_INIA_on_NMTv2.0_acpc_asym.png b/images/all_warp_pairs/Composite_INIA_on_NMTv2.0_acpc_asym.png
diff --git a/images/all_warp_pairs/Composite_INIA_on_NMTv2.0_acpc_sym.png b/images/all_warp_pairs/Composite_INIA_on_NMTv2.0_acpc_sym.png
diff --git a/images/all_warp_pairs/Composite_INIA_on_NMTv2.0_stereo_asym.png b/images/all_warp_pairs/Composite_INIA_on_NMTv2.0_stereo_asym.png
diff --git a/images/all_warp_pairs/Composite_INIA_on_NMTv2.0_stereo_sym.png b/images/all_warp_pairs/Composite_INIA_on_NMTv2.0_stereo_sym.png
diff --git a/images/all_warp_pairs/Composite_MNI_on_NMTv2.0_acpc_asym.png b/images/all_warp_pairs/Composite_MNI_on_NMTv2.0_acpc_asym.png
diff --git a/images/all_warp_pairs/Composite_MNI_on_NMTv2.0_acpc_sym.png b/images/all_warp_pairs/Composite_MNI_on_NMTv2.0_acpc_sym.png
diff --git a/images/all_warp_pairs/Composite_MNI_on_NMTv2.0_stereo_asym.png b/images/all_warp_pairs/Composite_MNI_on_NMTv2.0_stereo_asym.png
diff --git a/images/all_warp_pairs/Composite_MNI_on_NMTv2.0_stereo_sym.png b/images/all_warp_pairs/Composite_MNI_on_NMTv2.0_stereo_sym.png
diff --git a/images/all_warp_pairs/Composite_NMTv1.2_on_NMTv2.0_acpc_asym.png b/images/all_warp_pairs/Composite_NMTv1.2_on_NMTv2.0_acpc_asym.png
diff --git a/images/all_warp_pairs/Composite_NMTv1.2_on_NMTv2.0_acpc_sym.png b/images/all_warp_pairs/Composite_NMTv1.2_on_NMTv2.0_acpc_sym.png
diff --git a/images/all_warp_pairs/Composite_NMTv1.2_on_NMTv2.0_stereo_asym.png b/images/all_warp_pairs/Composite_NMTv1.2_on_NMTv2.0_stereo_asym.png
diff --git a/images/all_warp_pairs/Composite_NMTv1.2_on_NMTv2.0_stereo_sym.png b/images/all_warp_pairs/Composite_NMTv1.2_on_NMTv2.0_stereo_sym.png
diff --git a/images/all_warp_pairs/Composite_NMTv1.3_on_NMTv2.0_acpc_asym.png b/images/all_warp_pairs/Composite_NMTv1.3_on_NMTv2.0_acpc_asym.png
diff --git a/images/all_warp_pairs/Composite_NMTv1.3_on_NMTv2.0_acpc_sym.png b/images/all_warp_pairs/Composite_NMTv1.3_on_NMTv2.0_acpc_sym.png
diff --git a/images/all_warp_pairs/Composite_NMTv1.3_on_NMTv2.0_stereo_asym.png b/images/all_warp_pairs/Composite_NMTv1.3_on_NMTv2.0_stereo_asym.png
diff --git a/images/all_warp_pairs/Composite_NMTv1.3_on_NMTv2.0_stereo_sym.png b/images/all_warp_pairs/Composite_NMTv1.3_on_NMTv2.0_stereo_sym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_D99.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_D99.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_INIA.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_INIA.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_MNI.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_MNI.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_NMTv1.2.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_NMTv1.2.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_NMTv1.3.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_NMTv1.3.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_NMTv2.0_acpc_sym.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_NMTv2.0_acpc_sym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_asym.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_asym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_sym.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_sym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_YRK.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_asym_on_YRK.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_D99.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_D99.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_INIA.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_INIA.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_MNI.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_MNI.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_NMTv1.2.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_NMTv1.2.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_NMTv1.3.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_NMTv1.3.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_NMTv2.0_acpc_asym.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_NMTv2.0_acpc_asym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_asym.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_asym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_sym.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_sym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_YRK.png b/images/all_warp_pairs/Composite_NMTv2.0_acpc_sym_on_YRK.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_D99.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_D99.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_INIA.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_INIA.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_MNI.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_MNI.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_NMTv1.2.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_NMTv1.2.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_NMTv1.3.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_NMTv1.3.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_NMTv2.0_acpc_asym.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_NMTv2.0_acpc_asym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_NMTv2.0_acpc_sym.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_NMTv2.0_acpc_sym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_NMTv2.0_stereo_sym.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_NMTv2.0_stereo_sym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_YRK.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_asym_on_YRK.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_D99.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_D99.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_INIA.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_INIA.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_MNI.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_MNI.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_NMTv1.2.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_NMTv1.2.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_NMTv1.3.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_NMTv1.3.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_NMTv2.0_acpc_asym.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_NMTv2.0_acpc_asym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_NMTv2.0_acpc_sym.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_NMTv2.0_acpc_sym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_NMTv2.0_stereo_asym.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_NMTv2.0_stereo_asym.png
diff --git a/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_YRK.png b/images/all_warp_pairs/Composite_NMTv2.0_stereo_sym_on_YRK.png
diff --git a/images/all_warp_pairs/Composite_YRK_on_NMTv2.0_acpc_asym.png b/images/all_warp_pairs/Composite_YRK_on_NMTv2.0_acpc_asym.png
diff --git a/images/all_warp_pairs/Composite_YRK_on_NMTv2.0_acpc_sym.png b/images/all_warp_pairs/Composite_YRK_on_NMTv2.0_acpc_sym.png
diff --git a/images/all_warp_pairs/Composite_YRK_on_NMTv2.0_stereo_asym.png b/images/all_warp_pairs/Composite_YRK_on_NMTv2.0_stereo_asym.png
diff --git a/images/all_warp_pairs/Composite_YRK_on_NMTv2.0_stereo_sym.png b/images/all_warp_pairs/Composite_YRK_on_NMTv2.0_stereo_sym.png
diff --git a/images/linear_reg/Linear_NMTv1.2_on_NMTv2.0_acpc_asym.png b/images/linear_reg/Linear_NMTv1.2_on_NMTv2.0_acpc_asym.png
diff --git a/images/linear_reg/Linear_NMTv1.2_on_NMTv2.0_acpc_sym.png b/images/linear_reg/Linear_NMTv1.2_on_NMTv2.0_acpc_sym.png
diff --git a/images/linear_reg/Linear_NMTv1.2_on_NMTv2.0_stereo_asym.png b/images/linear_reg/Linear_NMTv1.2_on_NMTv2.0_stereo_asym.png
diff --git a/images/linear_reg/Linear_NMTv1.2_on_NMTv2.0_stereo_sym.png b/images/linear_reg/Linear_NMTv1.2_on_NMTv2.0_stereo_sym.png
diff --git a/images/linear_reg/Linear_NMTv1.3_on_NMTv2.0_acpc_asym.png b/images/linear_reg/Linear_NMTv1.3_on_NMTv2.0_acpc_asym.png
diff --git a/images/linear_reg/Linear_NMTv1.3_on_NMTv2.0_acpc_sym.png b/images/linear_reg/Linear_NMTv1.3_on_NMTv2.0_acpc_sym.png
diff --git a/images/linear_reg/Linear_NMTv1.3_on_NMTv2.0_stereo_asym.png b/images/linear_reg/Linear_NMTv1.3_on_NMTv2.0_stereo_asym.png
diff --git a/images/linear_reg/Linear_NMTv1.3_on_NMTv2.0_stereo_sym.png b/images/linear_reg/Linear_NMTv1.3_on_NMTv2.0_stereo_sym.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_D99.png b/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_D99.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_INIA.png b/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_INIA.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_MNI.png b/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_MNI.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_asym.png b/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_asym.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_sym.png b/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_sym.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_YRK.png b/images/linear_reg/Linear_NMTv2.0_acpc_asym_on_YRK.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_D99.png b/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_D99.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_INIA.png b/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_INIA.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_MNI.png b/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_MNI.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_NMTv2.0_acpc_asym.png b/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_NMTv2.0_acpc_asym.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_asym.png b/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_asym.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_sym.png b/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_sym.png
diff --git a/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_YRK.png b/images/linear_reg/Linear_NMTv2.0_acpc_sym_on_YRK.png
diff --git a/images/linear_reg/Linear_NMTv2.0_stereo_asym_on_D99.png b/images/linear_reg/Linear_NMTv2.0_stereo_asym_on_D99.png
diff --git a/images/linear_reg/Linear_NMTv2.0_stereo_asym_on_INIA.png b/images/linear_reg/Linear_NMTv2.0_stereo_asym_on_INIA.png
diff --git a/images/linear_reg/Linear_NMTv2.0_stereo_asym_on_MNI.png b/images/linear_reg/Linear_NMTv2.0_stereo_asym_on_MNI.png
diff --git a/images/linear_reg/Linear_NMTv2.0_stereo_asym_on_YRK.png b/images/linear_reg/Linear_NMTv2.0_stereo_asym_on_YRK.png
diff --git a/images/linear_reg/Linear_NMTv2.0_stereo_sym_on_D99.png b/images/linear_reg/Linear_NMTv2.0_stereo_sym_on_D99.png
diff --git a/images/linear_reg/Linear_NMTv2.0_stereo_sym_on_INIA.png b/images/linear_reg/Linear_NMTv2.0_stereo_sym_on_INIA.png
diff --git a/images/linear_reg/Linear_NMTv2.0_stereo_sym_on_MNI.png b/images/linear_reg/Linear_NMTv2.0_stereo_sym_on_MNI.png
diff --git a/images/linear_reg/Linear_NMTv2.0_stereo_sym_on_NMTv2.0_stereo_asym.png b/images/linear_reg/Linear_NMTv2.0_stereo_sym_on_NMTv2.0_stereo_asym.png
diff --git a/images/linear_reg/Linear_NMTv2.0_stereo_sym_on_YRK.png b/images/linear_reg/Linear_NMTv2.0_stereo_sym_on_YRK.png
diff --git a/images/metatemplate/MetaTemplate_in_NMTv1.3.png b/images/metatemplate/MetaTemplate_in_NMTv1.3.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv1.2_on_NMTv2.0_acpc_asym.png b/images/nonlinear_reg/Nonlinear_NMTv1.2_on_NMTv2.0_acpc_asym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv1.2_on_NMTv2.0_acpc_sym.png b/images/nonlinear_reg/Nonlinear_NMTv1.2_on_NMTv2.0_acpc_sym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv1.2_on_NMTv2.0_stereo_asym.png b/images/nonlinear_reg/Nonlinear_NMTv1.2_on_NMTv2.0_stereo_asym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv1.2_on_NMTv2.0_stereo_sym.png b/images/nonlinear_reg/Nonlinear_NMTv1.2_on_NMTv2.0_stereo_sym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv1.3_on_NMTv2.0_acpc_asym.png b/images/nonlinear_reg/Nonlinear_NMTv1.3_on_NMTv2.0_acpc_asym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv1.3_on_NMTv2.0_acpc_sym.png b/images/nonlinear_reg/Nonlinear_NMTv1.3_on_NMTv2.0_acpc_sym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv1.3_on_NMTv2.0_stereo_asym.png b/images/nonlinear_reg/Nonlinear_NMTv1.3_on_NMTv2.0_stereo_asym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv1.3_on_NMTv2.0_stereo_sym.png b/images/nonlinear_reg/Nonlinear_NMTv1.3_on_NMTv2.0_stereo_sym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_D99.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_D99.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_INIA.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_INIA.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_MNI.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_MNI.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_asym.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_asym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_sym.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_NMTv2.0_stereo_sym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_YRK.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_asym_on_YRK.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_D99.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_D99.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_INIA.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_INIA.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_MNI.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_MNI.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_NMTv2.0_acpc_asym.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_NMTv2.0_acpc_asym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_asym.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_asym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_sym.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_NMTv2.0_stereo_sym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_YRK.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_acpc_sym_on_YRK.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_asym_on_D99.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_asym_on_D99.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_asym_on_INIA.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_asym_on_INIA.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_asym_on_MNI.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_asym_on_MNI.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_asym_on_YRK.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_asym_on_YRK.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_sym_on_D99.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_sym_on_D99.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_sym_on_INIA.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_sym_on_INIA.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_sym_on_MNI.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_sym_on_MNI.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_sym_on_NMTv2.0_stereo_asym.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_sym_on_NMTv2.0_stereo_asym.png
diff --git a/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_sym_on_YRK.png b/images/nonlinear_reg/Nonlinear_NMTv2.0_stereo_sym_on_YRK.png
diff --git a/images/templates/NMTv2.0_acpc_asym_template.png b/images/templates/NMTv2.0_acpc_asym_template.png
diff --git a/images/templates/NMTv2.0_acpc_sym_template.png b/images/templates/NMTv2.0_acpc_sym_template.png
diff --git a/images/templates/NMTv2.0_stereo_asym_template.png b/images/templates/NMTv2.0_stereo_asym_template.png
diff --git a/images/templates/NMTv2.0_stereo_sym_template.png b/images/templates/NMTv2.0_stereo_sym_template.png
diff --git a/notebooks/macaque_template_warps.ipynb b/notebooks/macaque_template_warps.ipynb
@@ -13,7 +13,7 @@
    "source": [
     "**Authors:** Nikoloz Sirmpilatze (nsirmpilatze@dpz.eu) & Chris Klink (c.klink@nin.knaw.nl)                \n",
     "\n",
-    "**Last updated:** Feb 2020     \n",
+    "**Last updated:** April 30, 2020     \n",
     "\n",
     "**Requirements:**    \n",
     "* _python_ >= 3.7\n",
@@ -259,26 +259,6 @@
     "contrasts = [-1, 0, 0, 0, 0, 0, 0, -1, -0.5, 0] # specify to improve display"
    ]
   },
-  {
-   "cell_type": "code",
-   "execution_count": 68,
-   "metadata": {},
-   "outputs": [
-    {
-     "data": {
-      "text/plain": [
-       "[0, 0, 0, 0, 0, 0, 0, 0, 0, 0]"
-      ]
-     },
-     "execution_count": 68,
-     "metadata": {},
-     "output_type": "execute_result"
-    }
-   ],
-   "source": [
-    "[0]*len(temp_brains)"
-   ]
-  },
   {
    "cell_type": "markdown",
    "metadata": {},
@@ -845,30 +825,6 @@
     "* Plot the result"
    ]
   },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "metadata": {},
-   "outputs": [],
-   "source": [
-    "avg = ants.AverageImages(\n",
-    "    dimension=3,\n",
-    "    output_average_image=\"MetaTemplate_in_NMTv1.3.nii.gz\",\n",
-    "    normalize=True,\n",
-    "    images=[NMTv13_brain,\n",
-    "            \"NMTv1.2_in_NMTv1.3_composite.nii.gz\",\n",
-    "            \"D99_in_NMTv1.3_composite.nii.gz\", \n",
-    "            \"INIA_in_NMTv1.3_composite.nii.gz\", \n",
-    "            \"MNI_in_NMTv1.3_composite.nii.gz\",\n",
-    "            \"YRK_in_NMTv1.3_composite.nii.gz\"]);\n",
-    "avg.run();\n",
-    "\n",
-    "plot_anat(\"MetaTemplate_in_NMTv1.3.nii.gz\", display_mode='ortho', \n",
-    "          title=\"MetaTemplate in NMTv1.3\", draw_cross=False, annotate=True, dim=con);\n",
-    "plt.savefig('MetaTemplate_in_NMTv1.3.png')\n",
-    "plt.draw()"
-   ]
-  },
   {
    "cell_type": "markdown",
    "metadata": {},
@@ -928,7 +884,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "wtp = BASE_path + \"warped_templates/final\"\n",
+    "wtp = BASE_path + \"warped_templates/final/\"\n",
     "image_list = [NMTv13_brain]\n",
     "for file in os.listdir(wtp):\n",
     "    if file.split('_')[2] == 'NMTv1.3':\n",
@@ -966,6 +922,13 @@
     "os.makedirs(BASE_path + \"images/metatemplate\" , exist_ok=True)\n",
     "[os.rename(os.getcwd() + '/' + f, BASE_path + \"images/metatemplate/\" + f) for f in glob.glob('MetaTemplate*.png')];"
    ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": []
   }
  ],
  "metadata": {
@@ -984,7 +947,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.7.6"
+   "version": "3.8.1"
   },
   "toc-showcode": false,
   "toc-showmarkdowntxt": false