diff --git a/.github/workflows/R_CMD_check_Hades.yaml b/.github/workflows/R_CMD_check_Hades.yaml index 0047ccf9..c034d9e3 100644 --- a/.github/workflows/R_CMD_check_Hades.yaml +++ b/.github/workflows/R_CMD_check_Hades.yaml @@ -108,14 +108,14 @@ jobs: ) covr::to_cobertura(cov) shell: Rscript {0} - + - uses: codecov/codecov-action@v4 if: runner.os == 'Linux' with: file: ./cobertura.xml plugin: noop disable_search: true - token: ${{ secrets.CODECOV_TOKEN }} + token: ${{ secrets.CODECOV_TOKEN }} Release: needs: R-CMD-Check @@ -155,34 +155,33 @@ jobs: draft: false prerelease: false - # AGS: Commenting out until Strategus is in HADES - # - uses: r-lib/actions/setup-r@v2 - # if: ${{ env.new_version != '' }} - # - # - name: Install drat - # if: ${{ env.new_version != '' }} - # run: | - # install.packages('drat') - # shell: Rscript {0} - # - # - name: Remove any tarballs that already exists - # if: ${{ env.new_version != '' }} - # run: | - # rm -f *.tar.gz - # - # - name: Download package tarball - # if: ${{ env.new_version != '' }} - # uses: actions/download-artifact@v4 - # with: - # name: package_tarball - # - # - name: Push to drat - # if: ${{ env.new_version != '' }} - # run: | - # bash deploy.sh - # - # - name: Push to BroadSea - # if: ${{ env.new_version != '' }} - # run: | - # curl --data "build=true" -X POST https://registry.hub.docker.com/u/ohdsi/broadsea-methodslibrary/trigger/f0b51cec-4027-4781-9383-4b38b42dd4f5/ - # + - uses: r-lib/actions/setup-r@v2 + if: ${{ env.new_version != '' }} + + - name: Install drat + if: ${{ env.new_version != '' }} + run: | + install.packages('drat') + shell: Rscript {0} + + - name: Remove any tarballs that already exists + if: ${{ env.new_version != '' }} + run: | + rm -f *.tar.gz + + - name: Download package tarball + if: ${{ env.new_version != '' }} + uses: actions/download-artifact@v4 + with: + name: package_tarball + + - name: Push to drat + if: ${{ env.new_version != '' }} + run: | + bash deploy.sh + + - name: Push to BroadSea + if: ${{ env.new_version != '' }} + run: | + curl --data "build=true" -X POST https://registry.hub.docker.com/u/ohdsi/broadsea-methodslibrary/trigger/f0b51cec-4027-4781-9383-4b38b42dd4f5/ + diff --git a/NEWS.md b/NEWS.md index d5ba77b0..4ff14823 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,3 +1,7 @@ +Strategus 1.1.1 +=============== +- Fixes R CMD note and updates documentation for inclusion into HADES + Strategus 1.1.0 =============== - Inject cohort schema and table into `createCohortBasedCovariateSettings` (#181)