Add obspace templates for stat analysis job #173
Workflow file for this run
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| name: Run JCB client testing with client changes | |
| on: | |
| push: | |
| branches: | |
| - develop | |
| pull_request: | |
| types: | |
| - opened | |
| - synchronize | |
| - reopened | |
| jobs: | |
| jcb_integration_tests: | |
| runs-on: ubuntu-latest | |
| name: JCB Client Integration Tests | |
| env: | |
| JCB_REPO: https://github.com/NOAA-EMC/jcb.git | |
| steps: | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.x' | |
| - name: Add repo url to the environment | |
| run: | | |
| JCB_APP_REPO="${{ github.repository }}" | |
| echo "JCB_APP_REPO=${JCB_APP_REPO}" >> $GITHUB_ENV | |
| - name: Determine the name of the client branch | |
| run: | | |
| if [ "${{ github.event_name }}" == "pull_request" ]; then | |
| JCB_APP_BRANCH=${{ github.head_ref }} | |
| else | |
| BRANCH_REF=${{ github.ref }} | |
| JCB_APP_BRANCH=${BRANCH_REF#refs/heads/} | |
| fi | |
| echo "JCB_APP_BRANCH=$JCB_APP_BRANCH" >> $GITHUB_ENV | |
| - name: Determine branch to use for main jcb repo | |
| run: | | |
| BRANCH_NAME=${{ env.JCB_APP_BRANCH }} | |
| if git ls-remote --heads $JCB_REPO $BRANCH_NAME | grep -q "refs/heads/$BRANCH_NAME"; then | |
| echo "Branch $BRANCH_NAME exists in jcb repo." | |
| echo "JCB_BRANCH=$BRANCH_NAME" >> $GITHUB_ENV | |
| else | |
| echo "Branch $BRANCH_NAME does not exist in jcb repo. Using develop branch." | |
| echo "JCB_BRANCH=develop" >> $GITHUB_ENV | |
| fi | |
| - name: Check for the branch name in the jcb-algorithms repo (if not develop) | |
| run: | | |
| BRANCH_NAME=${{ env.JCB_APP_BRANCH }} | |
| # If branch name is develop then we don't need to check the jcb-algorithms repo. | |
| if [ "$BRANCH_NAME" == "develop" ]; then | |
| echo "JCB_ALGO_BRANCH=develop" >> $GITHUB_ENV | |
| exit 0 | |
| fi | |
| # If the branch is not develop then check the jcb-algorithms repo. | |
| if git ls-remote --heads https://github.com/NOAA-EMC/jcb-algorithms.git $BRANCH_NAME | grep -q "refs/heads/$BRANCH_NAME"; then | |
| echo "Branch $BRANCH_NAME exists in jcb-algorithms repo." | |
| echo "JCB_ALGO_BRANCH=$BRANCH_NAME" >> $GITHUB_ENV | |
| # If the branch exists in jcb-algorithms repo but JCB_BRANCH is develop then we need to | |
| # throw an error. This is not a safe situation. The developer should create a branch in | |
| # the main jcb repo with the same name as the branch in the jcb-application repo. | |
| # If there were branches in other apps to account for the changes in the algorithm repo | |
| # they could not be tested here since the scipt is not clever enough to check for | |
| # the existence of the branch being tested here in all the clients. The safest thing to do | |
| # is simply create a branch with the same name (even if empty) in the main jcb repo. This | |
| # will ensure the branches of the other applications are checked out by the init script. | |
| if [ "${{ env.JCB_BRANCH }}" == "develop" ]; then | |
| echo "Branch $BRANCH_NAME exists in jcb-algorithms repo but not in the main jcb repo. " | |
| echo "Please create a branch with the same name (even if empty with no PR) in the main " | |
| echo "jcb repo. This ensures safely checking all the clients that depend on the " | |
| echo "jcb and jcb-algorithms repos with the changes being proposed." | |
| exit 1 | |
| fi | |
| fi | |
| - name: Clone jcb repository | |
| run: | | |
| mkdir -p empty_hooks | |
| git config --global core.hooksPath empty_hooks | |
| git clone --branch ${{ env.JCB_BRANCH }} --recursive $JCB_REPO jcb_repo | |
| - name: Clone the clients | |
| run: | | |
| cd jcb_repo | |
| pip install pyyaml | |
| ./jcb_client_init.py | |
| # If all the branches are found then at this point everything should be good since | |
| # jcb_client_init will check out the correct branches. If not then the app branch needs to | |
| # be checked out explicitly. | |
| if [ "${{ env.JCB_BRANCH }}" != "${{ env.JCB_APP_BRANCH }}" ]; then | |
| echo "Checking out branch ${{ env.JCB_APP_BRANCH }} for ${{ env.JCB_APP_REPO }}" | |
| app_path=$(python jcb_client_path.py $JCB_APP_REPO) | |
| cd $app_path | |
| git checkout ${{ env.JCB_APP_BRANCH }} | |
| fi | |
| - name: Install dependencies | |
| run: | | |
| cd jcb_repo | |
| pip install .[testing] | |
| - name: Run the JCB client integration tests | |
| run: | | |
| cd jcb_repo/test/client_integration | |
| pytest -v |