Sync develop branch 20241220 to dev/ufs-weather-model #1337

Draft

JessicaMeixner-NOAA wants to merge 57 commits intoNOAA-EMC:dev/ufs-weather-modelfrom JessicaMeixner-NOAA:syncdev2ufs20241220

+13,127-2,442

Commits on Jul 31, 2023

minor bugfix for matrix grepping on keywords (NOAA-EMC#1049 )
mickaelaccensi
authored

Commits on Aug 4, 2023

Stop masking group 1 output where icec > icen (NOAA-EMC#1019 )
benoitp-cmc
authored

Commits on Aug 7, 2023

Doxygen documentation added, 8th subset.(NOAA-EMC#1046 )
MatthewMasarik-NOAA
authored

Commits on Aug 11, 2023

NC4 ,F90 ,XX0 switches removed from ww3_tp2.19 regtest (NOAA-EMC#1054 )
Ghazal-Mohammadpour
authored

Commits on Sep 2, 2023

CI: Fix for Intel scripts. GNU scripts updated. (NOAA-EMC#1064 )
MatthewMasarik-NOAA
authored

Commits on Sep 14, 2023

correct the computation of QP parameter, add QKK output parameter, change UST scale factor (NOAA-EMC#1050 )
mickaelaccensi
authored

Commits on Sep 21, 2023

correct issue with ww3_multi when requesting restart2 and using nml file instead of inp file (NOAA-EMC#1070 )
mickaelaccensi
authored

Commits on Sep 22, 2023

correct calendar for track netcdf output (NOAA-EMC#1079 )
mickaelaccensi
authored

Commits on Oct 10, 2023

Commits on Oct 12, 2023

new feature to output out_grd.ww3, out_pnt.ww3 and mod_def.ww3 both in binary and ascii format using switch ASCII. (NOAA-EMC#1089 )
mickaelaccensi
authored

Commits on Oct 16, 2023

Update local unit number arrays (NDS, MDS) to be same size of array defined in w3odatmd (size=15). Also, defined unit numbers for NDS(14) and NDS(15). (NOAA-EMC#1098 )
ukmo-ccbunney
authored

Commits on Oct 18, 2023

Removed code referencing PHIOC in output section for PHICE in ww3_ounf (NOAA-EMC#1093 )
ukmo-ccbunney
authored

Commits on Oct 19, 2023

implementation of the GQM (Gaussian Quadrature Method) to replace the DIA in NL1 or NL2. (NOAA-EMC#1083 )
mickaelaccensi
authored

Commits on Oct 31, 2023

update logic to ensure you are not accessing uninitialized dates (NOAA-EMC#1114 )
JessicaMeixner-NOAA
authored

Commits on Nov 1, 2023

Initialised S and D arrays in W3SDB1 before potential early return if zero energy. (NOAA-EMC#1115 )
ukmo-ccbunney
authored

Commits on Nov 2, 2023

ww3_ounp.F90: x/y units attribute corrected from 'm' to 'km' (NOAA-EMC#1088 )
Biao-Zhao
authored

Commits on Nov 6, 2023

Bugfix: Assign unit numbers to ASCII gridded/point output in multi-grid mode. (NOAA-EMC#1118 )
ukmo-ccbunney
authored

Commits on Nov 28, 2023

correct bugs to run correctly GQM implementation (NOAA-EMC#1127 )
mickaelaccensi
authored

Commits on Nov 30, 2023

Adding documentation to w3iopo() in preparation for code for NOAA-EMC#682 . (NOAA-EMC#1131 )
edwardhartnett
authored

Commits on Dec 7, 2023

NCEP regtest module updates: uses spack-stack/1.5.0, includes scotch/7.0.4 (NOAA-EMC#1137 )
MatthewMasarik-NOAA
authored

Commits on Dec 12, 2023

Minor update to ncep regtests (NOAA-EMC#1138 )
JessicaMeixner-NOAA
authored

Commits on Dec 26, 2023

Updated intel workflow to install oneapi compilers from new location. (NOAA-EMC#1157 )
edwardhartnett
authored

Commits on Jan 4, 2024

Add unit test for points I/O code. (NOAA-EMC#1158 )
edwardhartnett
authored

Commits on Jan 11, 2024

Update Intel CI (relocate /usr/local; ensure intel-oneapi-mpi; use ubuntu-latest) (NOAA-EMC#1161 )
AlexanderRichert-NOAA
authored

Commits on Jan 16, 2024

remove lookup table for ST4 to speed up computation and clean up the ST4 code (NOAA-EMC#1124 )

mickaelaccensi
and
Fabrice Ardhuin
authored

Commits on Jan 22, 2024

initialize USSP_WN for mod_def (NOAA-EMC#1165 )
JessicaMeixner-NOAA
authored

Commits on Jan 23, 2024

Introduce IC4M8 and IC4M9 to WW3 (NOAA-EMC#1176 )
ErickRogers
authored

Commits on Jan 25, 2024

clean up and add ST4 variables (NOAA-EMC#1181 )
mickaelaccensi
authored

Commits on Feb 5, 2024

Commits on Feb 15, 2024

Bugfix: address potential divide-by-zero in APPENDTAIL (NOAA-EMC#1188 )

MatthewMasarik-NOAA
and
DeniseWorthen
authored

Commits on Feb 23, 2024

Provide initial drying of cells with depth < ZLIM for SMC grid. (NOAA-EMC#1192 )
ukmo-ccbunney
authored

Commits on Mar 11, 2024

Output OMP threading info to screen when running ww3_shel/ww3_multi compiled with the OMPG switch. Also fixes truncation of build.log when running run_cmake_build. (NOAA-EMC#1191 )

ukmo-ccbunney
and
JessicaMeixner-NOAA
authored

Commits on Mar 12, 2024

update run_cmake_test to catch build errors and exit (NOAA-EMC#1194 )
JessicaMeixner-NOAA
authored

Commits on Mar 13, 2024

Commits on Apr 2, 2024

Commits on Apr 4, 2024

add output parameters for skewness (NOAA-EMC#1209 )

mickaelaccensi
and
Fabrice Ardhuin
authored

Commits on May 9, 2024

Add ice time variables to restart file (NOAA-EMC#1224 )

JessicaMeixner-NOAA
and
NickSzapiro-NOAA
authored

Commits on May 10, 2024

Functional form of Charnock calculation in ST4. (NOAA-EMC#1225 )
ukmo-ccbunney
authored

Commits on Jun 14, 2024

Add option to use NetCDF output instead of binary for point output (NOAA-EMC#1230 )

authored

Commits on Jun 24, 2024

Fix GNU regtest CI failure (NOAA-EMC#1253 )
MatthewMasarik-NOAA
authored

Commits on Jul 3, 2024

Fix code stability issue in ww3_outp (NOAA-EMC#1258 )

MatthewMasarik-NOAA
and
saeideh banihashemi
authored

Commits on Jul 15, 2024

Updates to NCEP regtests for Orion Rocky9 OS(NOAA-EMC#1263 )
MatthewMasarik-NOAA
authored

Commits on Jul 19, 2024

Commits on Aug 1, 2024

Enable doxygen documentation in the cmake build system (NOAA-EMC#1281 )
MatthewMasarik-NOAA
authored

Commits on Nov 8, 2024

README.md: update with link to doxygen documentation (NOAA-EMC#1316 )
MatthewMasarik-NOAA
authored

Commits on Nov 25, 2024

ww3_ufs1.x: fix typo in switch_MPI_OMPH (NOAA-EMC#1323 )
MatthewMasarik-NOAA
authored

Commits on Dec 12, 2024

Commits on Dec 13, 2024

Update IS_IN_UNGRID to handle if grid lon defintions are mismatched (NOAA-EMC#1325 )
JessicaMeixner-NOAA
authored

Commits on Dec 20, 2024