Skip to content
@Molmed

Uppsala University, Department of Medical Sciences, Molecular Precision Medicine

Molecular Precision Medicine research group and the SNP&SEQ Technology Platform

Pinned Loading

  1. irma-scripts irma-scripts Public

    Stand-alone scripts deployed to Irma

    Python 6

Repositories

Showing 10 of 59 repositories
  • seqreports Public

    This is a Nextflow pipeline for generating sequencing reports for the SNP&Seq Technology platform, NGI Uppsala, SciLifelab Genomics.

    Molmed/seqreports’s past year of commit activity
    Python 1 10 0 0 Updated Sep 30, 2024
  • SDashboard Public archive

    A visualization app written in Shiny to show sequencing metrics

    Molmed/SDashboard’s past year of commit activity
    R 0 MIT 5 0 0 Updated Sep 25, 2024
  • allium Public

    ALLIUM modifications for the ALLoy project (a private fork of Krali_2023)

    Molmed/allium’s past year of commit activity
    R 0 MIT 0 0 0 Updated Sep 23, 2024
  • gene-thesaurus Public

    Translates from older gene name aliases to the current HGNC standard gene name

    Molmed/gene-thesaurus’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Sep 20, 2024
  • checkQC Public

    CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria

    Molmed/checkQC’s past year of commit activity
    Python 25 GPL-3.0 16 10 (2 issues need help) 0 Updated Sep 12, 2024
  • sis_style_checksums_nextflow Public

    A Nextflow pipeline to generate sisyphus-style checksums

    Molmed/sis_style_checksums_nextflow’s past year of commit activity
    Nextflow 0 MIT 2 0 0 Updated Sep 10, 2024
  • Equine_Asthma_Cell_Atlas Public

    Analysis scripts for the Equine Asthma Cell Atlas project

    Molmed/Equine_Asthma_Cell_Atlas’s past year of commit activity
    R 0 0 0 0 Updated Aug 27, 2024
  • REH Public

    Analysis scripts for the REH cell line.

    Molmed/REH’s past year of commit activity
    Python 0 0 0 0 Updated May 23, 2024
  • snpseq-metadata-service Public
    Molmed/snpseq-metadata-service’s past year of commit activity
    Python 0 MIT 1 0 0 Updated May 16, 2024
  • snpseq_metadata Public Forked from b97pla/snpseq_metadata
    Molmed/snpseq_metadata’s past year of commit activity
    Python 0 1 0 0 Updated May 16, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…