Fix 3.8

.gitignore

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+/doc/data/

doc/0 - download exiobase.ipynb

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+{
+ "cells": [
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "import os"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "import pymrio"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "pymrio.download_exiobase3(\n",
+    "    storage_folder=os.path.join(os.getcwd(), 'data/pymrio_downloads'),\n",
+    "    years=['2022']\n",
+    ")"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3 (ipykernel)",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.9.16"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}

doc/1 - run ecospold2matrix.ipynb

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+{
+ "cells": [
+  {
+   "cell_type": "code",
+   "execution_count": 5,
+   "outputs": [],
+   "source": [
+    "import os"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 6,
+   "outputs": [],
+   "source": [
+    "import ecospold2matrix as e2m"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 7,
+   "metadata": {},
+   "outputs": [
+    {
+     "name": "stderr",
+     "output_type": "stream",
+     "text": [
+      "2023-01-24 14:39:28,778 - ecoinvent38 - INFO - Ecospold2Matrix Processing\n",
+      "2023-01-24 14:39:29,071 - ecoinvent38 - INFO - Current git commit: bcc307fdc19f968b06a7e5b6536ea5e9bcb2e914\n",
+      "2023-01-24 14:39:29,072 - ecoinvent38 - INFO - Project name: ecoinvent38\n",
+      "2023-01-24 14:39:29,073 - ecoinvent38 - INFO - Unit process and Master data directory: /home/lele/git/pylcaio_raw_raw/doc/data/ecoinvent 3.8_cutoff_ecoSpold02\n",
+      "2023-01-24 14:39:29,073 - ecoinvent38 - INFO - Data saved in: /home/lele/git/pylcaio_raw_raw/doc/data/ecospold2matrix_matrices/ecoinvent38\n",
+      "2023-01-24 14:39:29,074 - ecoinvent38 - INFO - Official rolled-up life cycle inventories in: /home/lele/git/pylcaio_raw_raw/doc/data/ecoinvent 3.8_cutoff_ecoSpold02/datasets\n",
+      "2023-01-24 14:39:29,075 - ecoinvent38 - INFO - Sign conventions changed to make waste flows positive\n",
+      "2023-01-24 14:39:29,075 - ecoinvent38 - INFO - Replace Not-a-Number instances with 0.0 in all matrices\n",
+      "2023-01-24 14:39:29,076 - ecoinvent38 - INFO - Pickle intermediate results to files\n",
+      "2023-01-24 14:39:29,076 - ecoinvent38 - INFO - Order processes based on: ISIC, activityName\n",
+      "2023-01-24 14:39:29,077 - ecoinvent38 - INFO - Order elementary exchanges based on: comp, name, subcomp\n",
+      "rm: cannot remove 'ecoinvent38_characterisation.db': No such file or directory\n",
+      "2023-01-24 14:39:29,138 - ecoinvent38 - WARNING - obs2char_subcomps constraints temporarily relaxed because not full recipe parsed\n"
+     ]
+    }
+   ],
+   "source": [
+    "parser = e2m.Ecospold2Matrix(\n",
+    "    sys_dir=os.path.join(os.getcwd(), 'data/ecoinvent 3.8_cutoff_ecoSpold02'),\n",
+    "    project_name='ecoinvent38',\n",
+    "    out_dir=os.path.join(os.getcwd(), 'data/ecospold2matrix_matrices/ecoinvent38'),\n",
+    "    lci_dir=os.path.join(os.getcwd(), 'data/ecoinvent 3.8_cutoff_ecoSpold02/datasets'),\n",
+    "    positive_waste=True,\n",
+    "    nan2null=True,\n",
+    "    version_name='3.8',\n",
+    "    characterisation_file=os.path.join(os.getcwd(), 'data/ecoinvent 3.8_LCIA_implementation/LCIA Implementation v3.8.xlsx')\n",
+    ")"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 8,
+   "metadata": {},
+   "outputs": [
+    {
+     "name": "stderr",
+     "output_type": "stream",
+     "text": [
+      "2023-01-24 14:39:29,536 - ecoinvent38 - INFO - Products extracted from IntermediateExchanges.xml with SHA-1 of 1da23bc8fd24d97422a2a21ba3626d2cdfa6a428\n",
+      "2023-01-24 14:40:24,671 - ecoinvent38 - WARNING - Removed 162 duplicate rows from activity_list, see duplicate_activity_list.csv.\n",
+      "2023-01-24 14:40:24,797 - ecoinvent38 - INFO - Activities extracted from ActivityIndex.xml with SHA-1 of 03403c01ac6f74a5d6cc5ca8820593f7e516b709\n",
+      "2023-01-24 14:40:24,833 - ecoinvent38 - INFO - Processing 19565 files in /home/lele/git/pylcaio_raw_raw/doc/data/ecoinvent 3.8_cutoff_ecoSpold02/datasets\n",
+      "2023-01-24 14:42:43,655 - ecoinvent38 - INFO - Flows saved in /home/lele/git/pylcaio_raw_raw/doc/data/ecoinvent 3.8_cutoff_ecoSpold02/flows.pickle with SHA-1 of 3d04666305776667caaac5221fd6dd2c4c07499b\n",
+      "2023-01-24 14:42:43,750 - ecoinvent38 - INFO - Processing 19565 files - this may take a while ...\n",
+      "2023-01-24 14:45:51,807 - ecoinvent38 - INFO - Elementary flows extracted from ElementaryExchanges.xml with SHA-1 of f65edb9180cc5fb6df99289157b5aab92d30c0d1\n",
+      "2023-01-24 14:45:51,918 - ecoinvent38 - INFO - Labels saved in /home/lele/git/pylcaio_raw_raw/doc/data/ecoinvent 3.8_cutoff_ecoSpold02/rawlabels.pickle with SHA-1 of 3b8391230c405f267b9649ae62739834caaf9eb4\n",
+      "2023-01-24 14:45:51,940 - ecoinvent38 - INFO - OK.   No untraceable flows.\n",
+      "2023-01-24 14:45:52,616 - ecoinvent38 - INFO - OK. Source activities seem in order. Each product traceable to an activity that actually does produce or distribute this product.\n",
+      "2023-01-24 14:45:53,147 - ecoinvent38 - INFO - Starting to assemble the matrices\n",
+      "2023-01-24 14:46:00,678 - ecoinvent38 - INFO - fillna\n",
+      "2023-01-24 14:46:12,500 - ecoinvent38 - INFO - Starting normalizing matrices\n",
+      "2023-01-24 14:47:20,633 - ecoinvent38 - INFO - Characterisation file seems to be ecoinvent LCIA implementation. Will apply simple name matching\n",
+      "2023-01-24 14:47:39,928 - ecoinvent38 - INFO - Starting characterisation matching\n",
+      "2023-01-24 14:47:42,444 - ecoinvent38 - INFO - Characterisation matching done. C matrix created\n",
+      "2023-01-24 14:47:42,458 - ecoinvent38 - INFO - Starting to export to file\n",
+      "2023-01-24 14:47:42,459 - ecoinvent38 - INFO - about to write to file\n",
+      "2023-01-24 14:48:49,496 - ecoinvent38 - INFO - Final, symmetric, normalized matrices saved in /home/lele/git/pylcaio_raw_raw/doc/data/ecospold2matrix_matrices/ecoinvent38/ecoinvent38Pandas_symmNorm.gz.pickle with SHA-1 of cd2bc679856e0a95df7eed0220f414843ccea2fe\n",
+      "2023-01-24 14:48:49,497 - ecoinvent38 - INFO - Done running ecospold2matrix.ecospold_to_Leontief\n"
+     ]
+    }
+   ],
+   "source": [
+    "parser.ecospold_to_Leontief(fileformats='Pandas', with_absolute_flows=False)"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [],
+   "metadata": {
+    "collapsed": false
+   }
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3 (ipykernel)",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.9.16"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}

doc/2 - run pylcaio.ipynb

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+{
+ "cells": [
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "import os\n",
+    "os.environ['BRIGHTWAY2_DIR'] = os.path.join(os.getcwd(), 'data/brightway')"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "import sys\n",
+    "sys.path.append(os.path.join(os.path.dirname(os.getcwd()), 'src'))"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "import gzip\n",
+    "import pandas as pd\n",
+    "import pymrio\n",
+    "import pylcaio"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "with gzip.open(\n",
+    "        os.path.join(os.getcwd(), 'data/ecospold2matrix_matrices/ecoinvent38/ecoinvent38Pandas_symmNorm.gz.pickle'),\n",
+    "        'rb') as f:\n",
+    "    ecoinvent = pd.read_pickle(f)"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "io = pymrio.parse_exiobase3(path=os.path.join(os.getcwd(), 'data/pymrio_downloads/IOT_2022_pxp.zip')).calc_all()"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "database_loader = pylcaio.DatabaseLoader(\n",
+    "    lca_database_processed=ecoinvent,\n",
+    "    io_database_processed=io,\n",
+    "    lca_database_name_and_version='ecoinvent3.8',\n",
+    "    io_database_name_and_version='exiobase3'\n",
+    ")"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "lcaio_object = database_loader.combine_ecoinvent_exiobase(\n",
+    "    complete_extensions=False,\n",
+    "    impact_world=True,\n",
+    "    regionalized=False\n",
+    ")"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "lcaio_object.hybridize('STAM')"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "outputs": [],
+   "source": [
+    "lcaio_object.save_system('pickle')"
+   ],
+   "metadata": {
+    "collapsed": false
+   }
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "Python 3",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 2
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython2",
+   "version": "2.7.6"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 0
+}