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merge devel - alignment with Bioc 3.19 version + bug fix #329

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merged 2 commits into from
May 21, 2024
Merged

merge devel - alignment with Bioc 3.19 version + bug fix #329

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bb59f9b
add bpstopOnError import statement a la #328
MikeDMorgan May 21, 2024
f752de7
bump github version to align with Bioc
MikeDMorgan May 21, 2024
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2 changes: 1 addition & 1 deletion DESCRIPTION
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Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
Package: miloR
Type: Package
Title: Differential neighbourhood abundance testing on a graph
Version: 1.99.16
Version: 2.0.0
Authors@R:
c(person("Mike", "Morgan", role=c("aut", "cre"), email="michael.morgan@abdn.ac.uk",
comment=c(ORCID="0000-0003-0757-0711")),
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1 change: 1 addition & 0 deletions R/glmm.R
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Expand Up @@ -73,6 +73,7 @@
#' @importMethodsFrom Matrix %*%
#' @importFrom Matrix Matrix solve crossprod kronecker
#' @importFrom stats runif var
#' @importFrom BiocParallel bpstopOnError
#' @export
fitGLMM <- function(X, Z, y, offsets, init.theta=NULL, Kin=NULL,
random.levels=NULL, REML=FALSE,
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