From 5aea486b91b842a183477b25f6c740b5d7aed008 Mon Sep 17 00:00:00 2001 From: LTLA Date: Tue, 10 Dec 2024 14:50:38 -0800 Subject: [PATCH] Added a README and the Encoding field. --- DESCRIPTION | 1 + README.md | 10 ++++++++++ 2 files changed, 11 insertions(+) create mode 100644 README.md diff --git a/DESCRIPTION b/DESCRIPTION index dd49a82..ded3501 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -65,3 +65,4 @@ LinkingTo: scuttle SystemRequirements: C++11, GNU make RoxygenNote: 7.3.2 +Encoding: UTF-8 diff --git a/README.md b/README.md new file mode 100644 index 0000000..d155753 --- /dev/null +++ b/README.md @@ -0,0 +1,10 @@ +# Utilities for handling single-cell droplet datasets + +|Environment|Status| +|---|---| +|[BioC-release](https://bioconductor.org/packages/release/bioc/html/DropletUtils.html)|[![Release OK](https://bioconductor.org/shields/build/release/bioc/DropletUtils.svg)](https://bioconductor.org/checkResults/release/bioc-LATEST/DropletUtils/)| +|[BioC-devel](https://bioconductor.org/packages/devel/bioc/html/DropletUtils.html)|[![Devel OK](https://bioconductor.org/shields/build/devel/bioc/DropletUtils.svg)](https://bioconductor.org/checkResults/devel/bioc-LATEST/DropletUtils/)| + +The **DropletUtils** package provides a number of utility functions for handling single-cell (RNA-seq) data from droplet technologies such as 10X Genomics. +This includes data loading from count matrices or molecule information files, identification of cells from empty droplets, removal of barcode-swapped pseudo-cells, and downsampling of the count matrix. +Check out the [Bioconductor landing page](https://bioconductor.org/packages/DropletUtils) for more details.