Updated versions of BioC and actions in the CHECK workflow. #25
Annotations
3 errors and 15 warnings
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Install dependencies pass 2
Failed to install 'DropletUtils' from local:
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Install dependencies pass 2
Process completed with exit code 1.
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Setup R from r-lib
No such keg: /opt/homebrew/Cellar/pkg-config@0.29.2
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Install BiocManager
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Install macOS system dependencies
harfbuzz 10.1.0 is already installed and up-to-date.
To reinstall 10.1.0, run:
brew reinstall harfbuzz
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Install macOS system dependencies
fribidi 1.0.16 is already installed and up-to-date.
To reinstall 1.0.16, run:
brew reinstall fribidi
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Install macOS system dependencies
macOS's Gatekeeper has been disabled for this Cask
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Install macOS system dependencies
openssl@3 3.4.0 is already installed and up-to-date.
To reinstall 3.4.0, run:
brew reinstall openssl@3
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Set BiocVersion
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
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Set BiocVersion
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://bioconductor.org/packages/3.21/workflows/bin/macosx/big-sur-arm64/contrib/4.5:
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Install dependencies pass 1
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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Upload check results
No files were found with the provided path: check. No artifacts will be uploaded.
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Setup R from r-lib
pkgconf 2.3.0_1 is already installed and up-to-date.
To reinstall 2.3.0_1, run:
brew reinstall pkgconf
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Setup R from r-lib
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated
dependents or dependents with broken linkage!
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Query dependencies
unable to access index for repository https://cran.rstudio.com/bin/macosx/big-sur-arm64/contrib/4.5:
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