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@smangul1 smangul1 released this 03 Aug 03:52
· 38 commits to master since this release

This is a new release with the following fixes and changes:

  • We have added a step to filter microbial contigs, which are homologous to human
  • Filtered contigs are mapped to the microbial database, allowing one to detect the structural variants
  • Instructions on how to use the tool were updated.
  • A detailed description of the output of needle was added and is available here at https://github.com/smangul1/needle/wiki/Needle-output-details