Removed the release's tag name

MEDomics-UdeS · Dec 4, 2023 · d979675 · d979675
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commit d979675
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Showing 3 changed files with 2 additions and 4 deletions.
diff --git a/.github/workflows/automaticBuilding.yml b/.github/workflows/automaticBuilding.yml
@@ -276,8 +276,6 @@ jobs:
             ./MEDomicsLab-PythonEnv-win.zip
             ./MEDomicsLab-PythonEnv-linux.zip
             ./MEDomicsLab-PythonEnv-mac.zip
-
-          tag_name: full-${{ github.ref }}
           name: MEDomicsLab-${{ env.VERSION }}
           body: |
             MEDomicsLab-${{ env.VERSION }}

diff --git a/pythonCode/submodules/MEDimage b/pythonCode/submodules/MEDimage
diff --git a/pythonCode/submodules/MEDprofiles b/pythonCode/submodules/MEDprofiles
+77 −149		MEDimage/MEDimage.py
+1 −1		MEDimage/__init__.py
+96 −129		MEDimage/biomarkers/BatchExtractor.py
+1 −2		MEDimage/biomarkers/diagnostics.py
+10 −10		MEDimage/biomarkers/glcm.py
+45 −45		MEDimage/biomarkers/int_vol_hist.py
+2 −2		MEDimage/biomarkers/intensity_histogram.py
+2 −9		MEDimage/biomarkers/local_intensity.py
+128 −138		MEDimage/biomarkers/morph.py
+2 −2		MEDimage/biomarkers/ngldm.py
+22 −31		MEDimage/biomarkers/stats.py
+40 −50		MEDimage/filters/apply_filter.py
+19 −26		MEDimage/filters/gabor.py
+12 −12		MEDimage/filters/laws.py
+11 −11		MEDimage/filters/log.py
+9 −9		MEDimage/filters/mean.py
+11 −12		MEDimage/filters/wavelet.py
+29 −53		MEDimage/processing/interpolation.py
+34 −34		MEDimage/processing/segmentation.py
+1 −2		MEDimage/utils/__init__.py
+7 −13		MEDimage/utils/create_radiomics_table.py
+0 −21		MEDimage/utils/get_full_rad_names.py
+7 −8		MEDimage/utils/get_institutions_from_ids.py
+59 −0		MEDimage/utils/initMEDimage.py
+5 −5		MEDimage/utils/inpolygon.py
+6 −8		MEDimage/utils/json_utils.py
+28 −0		MEDimage/utils/save_MEDimage.py
+0 −30		MEDimage/utils/save_MEDscan.py
+0 −1		MEDimage/utils/write_radiomics_csv.py
+264 −308		MEDimage/wrangling/DataManager.py
+51 −69		MEDimage/wrangling/ProcessDICOM.py
+25 −65		README.md
+8 −8		docs/Installation.rst
+3 −3		docs/MEDimage.rst
+75 −444		docs/configuration_file.rst
+13 −81		docs/csv_file.rst
+ −		docs/figures/BatchExtractor-overview.png
+ −		docs/figures/DataManager-overview.png
+ −		docs/figures/InputDataSummary.png
+ −		docs/figures/ROILabelExample.png
+ −		docs/figures/RoiNamesExample.png
+ −		docs/figures/pakcage-overview.png
+19 −0		docs/filter.rst
+0 −59		docs/filters.rst
+0 −1		docs/index.rst
+0 −104		docs/input_data.rst
+2 −2		docs/modules.rst
+8 −8		docs/tutorials.rst
+10 −2		docs/utils.rst
+0 −1		environment.yml
+130 −143		notebooks/demo/Glioma-Demo.ipynb
+ −		notebooks/demo/data/Glioma-TCGA-02-0003__T1.MRscan.npy
+9 −8		notebooks/ibsi/ibsi1p1.ipynb
+29 −23		notebooks/ibsi/ibsi1p2.ipynb
+11 −11		notebooks/ibsi/ibsi2p1.ipynb
+47 −20		notebooks/ibsi/ibsi2p2.ipynb
+5 −33		notebooks/tutorial/BatchExtractor-Tutorial.ipynb
+64 −67		notebooks/tutorial/DataManager-Tutorial.ipynb
+47 −40		notebooks/tutorial/MEDimage-Tutorial.ipynb
+ −		notebooks/tutorial/images/BatchExtractionFolderStructure.png
+ −		notebooks/tutorial/images/DataManager-workflow.png
+ −		notebooks/tutorial/images/DataManagerFolderStructure.png
+ −		notebooks/tutorial/images/MEDimageClassDiagram.png
+ −		notebooks/tutorial/images/MEDimageFlowchart.png
+ −		notebooks/tutorial/images/MEDimageFolderStructure.png
+4 −16		notebooks/tutorial/settings/MEDimage-Tutorial.json
+1 −1		python.md
+1 −2		requirements.txt
+0 −43		scripts/process_dataset.py
+0 −2		.gitignore
+0 −95		.idea/workspace.xml
+ −		MEDclasses/__pycache__/MEDbaseObject.cpython-38.pyc
+ −		MEDclasses/__pycache__/MEDcohort.cpython-38.pyc
+ −		MEDclasses/__pycache__/MEDprofile.cpython-38.pyc
+ −		MEDclasses/__pycache__/MEDtab.cpython-38.pyc
+5 −21		MEDprofiles/MEDclasses/MEDcohort.py
+1 −1		MEDprofiles/MEDclasses/MEDprofile.py
+2 −1		MEDprofiles/MEDclasses/MEDtab.py
+0 −2		MEDprofiles/__init__.py
+1 −2		MEDprofiles/src/__init__.py
+12 −25		MEDprofiles/src/back/create_classes_from_master_table.py
+8 −21		MEDprofiles/src/back/instantiate_data_from_master_table.py
+5 −5		MEDprofiles/src/semi_front/MEDcohortFigure.py
+2 −2		MEDprofiles/src/semi_front/MEDprofileFigure.py
+3 −2		MEDprofiles/src/semi_front/utils/MEDcohort_utils.py
+3 −2		MEDprofiles/src/semi_front/utils/MEDprofiles_utils.py
+ −		data/meningioma/__pycache__/create_master_table.cpython-38.pyc
+ −		data/mimic/__pycache__/create_master_table.cpython-38.pyc
+2 −4		requirements.txt
+1 −1		setup.py
+ −		src/back/__pycache__/constant.cpython-38.pyc
+ −		src/back/__pycache__/create_classes_from_master_table.cpython-38.pyc
+ −		src/back/__pycache__/instantiate_data_from_master_table.cpython-38.pyc
+ −		src/semi_front/__pycache__/MEDcohort_utils.cpython-38.pyc
+ −		src/semi_front/__pycache__/MEDprofiles_utils.cpython-38.pyc