From 1e53ee91d7da4bee9a42d34f1ae0b504d6109892 Mon Sep 17 00:00:00 2001
From: Ubuntu <lseninge@ucsc.edu>
Date: Fri, 14 Jan 2022 20:42:39 +0000
Subject: [PATCH] add conda build

---
 bld.bat   |  2 ++
 build.sh  |  1 +
 meta.yaml | 32 ++++++++++++++++++++++++++++++++
 setup.py  | 22 ++++++++++++++++++++++
 4 files changed, 57 insertions(+)
 create mode 100644 bld.bat
 create mode 100644 build.sh
 create mode 100644 meta.yaml
 create mode 100644 setup.py

diff --git a/bld.bat b/bld.bat
new file mode 100644
index 0000000..c40a9bb
--- /dev/null
+++ b/bld.bat
@@ -0,0 +1,2 @@
+"%PYTHON%" setup.py install
+if errorlevel 1 exit 1
diff --git a/build.sh b/build.sh
new file mode 100644
index 0000000..a40f109
--- /dev/null
+++ b/build.sh
@@ -0,0 +1 @@
+$PYTHON setup.py install     # Python command to install the script.
diff --git a/meta.yaml b/meta.yaml
new file mode 100644
index 0000000..5e2eb83
--- /dev/null
+++ b/meta.yaml
@@ -0,0 +1,32 @@
+package:
+  name: "scorect"
+  version: "0.0.1"
+
+source:
+  git_rev: v0.0.1
+  git_url: https://github.com/LucasESBS/scoreCT
+
+requirements:
+  host:
+    - python
+    - setuptools
+  build:
+    - python
+  run:
+    - python
+    - pandas
+    - numpy
+    - requests
+    - matplotlib
+    - seaborn
+
+about:
+  home: https://github.com/LucasESBS/scoreCT
+  license: MIT
+  license_familY: MIT
+  license_file: LICENSE
+  summary: "Automated cell type annotation for scRNA-seq data in Scanpy"
+
+extra:
+  recipe-maintainers:
+    - LucasESBS
diff --git a/setup.py b/setup.py
new file mode 100644
index 0000000..f328235
--- /dev/null
+++ b/setup.py
@@ -0,0 +1,22 @@
+import setuptools
+
+with open("README.md", "r", encoding="utf-8") as fh:
+    long_description = fh.read()
+
+
+setuptools.setup(
+    name="scorect",
+    version="0.0.1",
+    author="Lucas Seninge",
+    author_email="lseninge@ucsc.edu",
+    description="scoreCT: Automated cell type annotation in scRNA-seq data",
+    long_description=long_description,
+    long_description_content_type="text/markdown",
+    url="https://github.com/LucasESBS/scoreCT",
+    packages=setuptools.find_packages(),
+    classifiers=(
+            "Programming Language :: Python :: 3",
+            "License :: OSI Approved :: MIT License",
+            "Operating System :: OS Independent",
+            ),
+)