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Merge pull request #113 from LiuzLab/removeproxy
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remove proxy setting
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jylee-bcm authored Dec 18, 2024
2 parents 75f7ca1 + 7f05415 commit c33fd8d
Showing 1 changed file with 0 additions and 3 deletions.
3 changes: 0 additions & 3 deletions main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -245,9 +245,6 @@ process BUILD_REFERENCE_INDEX {

script:
"""
export http_proxy=http://your.proxy.server:port
export https_proxy=http://your.proxy.server:port
wget --quiet http://hgdownload.soe.ucsc.edu/goldenPath/${params.ref_ver}/bigZips/${params.ref_ver}.fa.gz
gunzip ${params.ref_ver}.fa.gz
sed 's/>chr/>/g' ${params.ref_ver}.fa > num_prefix_${params.ref_ver}.fa
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