- Several minor bug fixes
- Updated
createEmbedding
upon resolve of kharchenkolab/conos#123 - Updated DESCRIPTION
- Added checks for
detectDoublets
- Added possibility for multiple paths for "data.path" argument in
initialize
- Changed depth calculation from Conos depth to raw depth, i.e., column sums
- Added plotting palette to object through argument
pal
- Fixed bug for
filterCms
wherespecies
was not forwarded togetMitoFraction
internally - Moved adding list of CMs to CRMetrics object from addDetailedMetrics() to addCms() since this is more logical
detectDoublets
can now export Python script with argumentexport = TRUE
- Added
addDoublets
function to add doublet results generated with exported Python scripts - Updated vignette
- Updated tests and examples to pass CRAN checks
- Prepared for submission to CRAN
- Added a
NEWS.md
file to track changes to the package.