Apptainer for LANDIS-II v8 with all extensions - v1

Apptainer generated using the Dockerfile of this repository.

⚠️ Many extensions are still missing as they have not been ported to LANDIS-II v8 yet (e.g. PnET Succession, etc.). Also, not everything has been tested, and you might encounter some bugs or compatibility issues.

💡 The bug identified by Melissa Lucash here should be absent from the versions of the extensions used here.

Contains :

• Ubuntu 22.04 as the base OS
• LANDIS-II v7 and all of its extensions installed and compiled
  • Succession
    • Biomass Succession 7.0
    • NECN Succession 8.0.1
  • Disturbances
    • Original Fire 5.0
    • Social Climate Fire 4.0
    • Dynamic Fuel System 4.0
    • Dynamic Fire System 4.0
    • Biomass Harvest 6.0
    • Forest Roads Simulation 2.0
    • Magic Harvest 2.1
    • Original Wind 4.0
    • Linear Wind 3.0
    • Hurricane 3.0
    • Climate BDA 5.0
    • Land Use Change 4.0
  • Output
    • Output Max Species Age 4.0
    • Output Biomass-by-Age 4.0
    • Output Biomass Community 3.0
    • Output Biomass 4.0
    • Output Biomass Reclass 4.0
    • Output Cohort Statistics 4.0
    • Local Habitat Output 3.0
    • Wildlife Habitat Output 3.0
  • For more details about these versions (and the specific Github commits that where used to build each extension), please look at the Dockerfile. Every extension is at its latest version at the date of January 2025.
• All dependencies necessary for LANDIS-II (i.e. dotnet, GDAL, etc.)
• Python (necessary for the build)

To use this Apptainer file to run a LANDIS-II simulation; please check the instructions in the README of this repository.

Apptainer for LANDIS-II v7 with all extensions - v1

Apptainer generated using the Dockerfile of this repository.

Contains :

• Ubuntu 22.04 as the base OS
• LANDIS-II v7 and all of its extensions installed and compiled
  • Succession
    • Age-Only Succession 5.1
    • Biomass Succession 6.1
    • NECN Succession 7.0
    • PnET-Succession 5.1 (Release candidate 6)
    • ForC Succession 3.1
  • Disturbances
    • Base Fire 4.0
    • BFOLDS Fire Regime Module 2.3
    • SCRAPPLE 3.2
    • Dynamic Fuel System 3.0
    • Dynamic Biomass Fuels 3.0
    • Dynamic Fire System 3.0
    • Base Harvest 5.2
    • Biomass Harvest 4.6
    • SOSIEL Harvest 1.2
    • Forest Road Simulation 1.3.1
    • Magic Harvest 1.3
    • Base Wind 3.1
    • Linear Wind 2.0
    • Biomass Hurricane 2.0
    • Base BDA 4.1.0 (Release candidate 1)
    • Root Rot 1.1 (Beta)
    • Biomass Browse 2.0
    • Land Use Change 3.1
  • Output
    • Output Max Species Age 3.0
    • Output Biomass-by-Age 3.0
    • Output Biomass Community 2.0
    • Output Biomass 3.0
    • Output Biomass Reclass 3.1
    • Output Cohort Statistics 3.0
    • Output Landscape Habitat 1.0
    • Local Habitat Output 2.0
    • Output-PnET 5.1 (Release candidate 2)
    • Wilflife Habitat Output 2.0
  • For more details about these versions (and the specific Github commits that where used to build each extension), please look at the Dockerfile. Every extension is at its latest version before the upgrade to LANDIS-II v8, except for Biomass Harvest because of a compatibility issue.
• All dependencies necessary for LANDIS-II (i.e. dotnet, GDAL, etc.)
• Python (necessary for the build)

To use this Apptainer file to run a LANDIS-II simulation; please check the instructions in the README of this repository.