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{id} in history storage filename #1118

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merged 7 commits into from
Oct 10, 2023
Merged

{id} in history storage filename #1118

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675fba7
allow {id} in history filename together with multiprocessing
plakrisenko Sep 14, 2023
82a9ee4
Merge branch 'develop' into id_in_history_storage_filename
PaulJonasJost Oct 4, 2023
46a5589
Merge branch 'develop' into id_in_history_storage_filename
PaulJonasJost Oct 9, 2023
d2f97ef
Merge branch 'develop' into id_in_history_storage_filename
PaulJonasJost Oct 9, 2023
50951c8
Merge branch 'develop' into id_in_history_storage_filename
plakrisenko Oct 10, 2023
d6569d6
Merge branch 'develop' into id_in_history_storage_filename
plakrisenko Oct 10, 2023
629732c
Black rework
PaulJonasJost Oct 10, 2023
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14 changes: 11 additions & 3 deletions pypesto/optimize/util.py
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Original file line number Diff line number Diff line change
Expand Up @@ -61,9 +61,15 @@ def preprocess_hdf5_history(
return False

# create directory with same name as original file stem
template_path = (
path.parent / path.stem / (path.stem + "_{id}" + path.suffix)
)
if "{id}" in path.stem:
template_path = (
path.parent / path.stem.replace("{id}", "") / (
path.stem + path.suffix)
)
else:
template_path = (
path.parent / path.stem / (path.stem + "_{id}" + path.suffix)
)
template_path.parent.mkdir(parents=True, exist_ok=True)
# set history file to template path
history_options.storage_file = str(template_path)
Expand Down Expand Up @@ -92,6 +98,8 @@ def postprocess_hdf5_history(
History options used in the optimization.
"""
# create hdf5 file that gathers the others within history group
if "{id}" in storage_file:
storage_file = storage_file.replace("{id}", "")
with h5py.File(storage_file, mode='w') as f:
# create file and group
f.require_group("history")
Expand Down
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