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51 Open 63 Closed
51 Open 63 Closed
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Issues list

useMart and listEnsembl : Timeout was reached. Unable to query any Ensembl site
#119 opened Apr 7, 2025 by corinabioinformatic
Documentation outdated
#118 opened Mar 25, 2025 by corinabioinformatic
@grimbough
1
getLDS function error : Error in httr2::req_perform():
#116 opened Feb 10, 2025 by wangxudong1234
1
getBM won't return cdna and peptide together
#115 opened Jan 27, 2025 by kwells4
1
Erroneous residues at the end of peptide sequences
#112 opened Oct 2, 2024 by KoppGergely
getSequence => missing attributes for your exportable?
#111 opened Sep 4, 2024 by nick-youngblut
3
pberghei_eg_gene geneset have all genes missing as compared to PlasmoDB
#110 opened Aug 17, 2024 by Rohit-Satyam
@grimbough
6
getLDS function query.....
#106 opened Jul 1, 2024 by Shikari666
Query ERROR
#104 opened May 14, 2024 by Struggle-Lee
@grimbough
7
SEC_E_CERT_EXPIRED
#102 opened Apr 10, 2024 by t-whalley
getBM(attributes="minor_allele") returns results "NA"s
#101 opened Mar 24, 2024 by Nerissa-258
Error getLDS()
#100 opened Mar 21, 2024 by Kan-E
2
Error choosing mirror
#99 opened Mar 21, 2024 by Merguerrero
Error accessing biomart
#98 opened Mar 20, 2024 by SamTah
More robustness against ensemble errors
#97 opened Mar 15, 2024 by Mitmischer
@grimbough
1
Wrong results returned for queries of multiple genes
#96 opened Mar 15, 2024 by Mitmischer
Unable to download non-reference genome.
#95 opened Mar 12, 2024 by raymondconor21
ensembl_peptide_id_version in zebrafish?
#92 opened Dec 27, 2023 by marwa38
Possible SSL connectivity problems detected: How can I possibly fix this?
#87 opened Sep 14, 2023 by Shrishtee-kandoi
1
how to convert cpg id's to genes using biomart in R
#86 opened Aug 25, 2023 by reem0331
Error: biomaRt has encountered an unknown server error. HTTP error code: 502（404）
#85 opened Aug 3, 2023 by AndoYutaro
1
Error in curl::curl_fetch_memory(url, handle = handle)
#84 opened Jul 20, 2023 by powerhorse1986
Non protein_coding biotypes
#83 opened Jul 6, 2023 by AHinsu
Error: biomaRt has encountered an unknown server error. HTTP error code: 404
#82 opened Jun 19, 2023 by hyjforesight
1
GEDI package
#77 opened Jun 2, 2023 by Maryan12m
@grimbough
2
ProTip! Exclude everything labeled bug with -label:bug.