Why is there a celining in the addPeakMatrix function? #2176
piyushjo15
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Hi,
My question is why is there a
ceilingparameter inaddPeakMatrix()function? Does it cause highly enriched CRE regions to be under-counted? When there is normalization of the peaks which uses theceilingparameter, is it some sort of scaling? Can I make theceilingasNULL?What is an appropriate
ceilingfor a dataset with 400K cells? I am assume that the defaultceiling=4is for a typical sample having 3-5k cells, or am I wrong?Beta Was this translation helpful? Give feedback.
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