Genomic Medicine Linköping
Popular repositories Loading
-
var-genes-ro
var-genes-ro PublicVirulence and Antibiotic Resistance Genes used with JASEN pipeline at the university hospital of Linköping, Sweden.
Jupyter Notebook 1
-
-
-
Repositories
- raredisease Public Forked from nf-core/raredisease
Call and score variants from WGS/WES of rare disease patients.
- gms-artic Public Forked from genomic-medicine-sweden/gms-artic
A nextflow pipeline with a GMS touch for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics).
- JASEN Public Forked from genomic-medicine-sweden/jasen
Epitypification pipeline for clinical NGS data. Written in NextFlow, Python & Bash.
- pgx_module Public Forked from JoelAAs/pgx_module
Anlysis of pharmacogenomic targets from Genomic Medicine Swedens heamatology panel.
- gmsmetapost Public Forked from genomic-medicine-sweden/gmsmetapost
GMS Metagenomics post-classification
- KITM_fastq_preprocessing Public Forked from ljmesi/KITM_fastq_preprocessing
QC and trimming of fastq reads