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@FredHutch

Fred Hutch Cancer Center

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  1. Oncoscape Oncoscape Public

    a web application to apply/develop analysis tools for Molecular and Clinical data

    JavaScript 179 45

  2. SEACR SEACR Public

    SEACR: Sparse Enrichment Analysis for CUT&RUN

    Shell 107 45

  3. motuz motuz Public

    Motuz - A web based infrastructure for large scale data movements between on-premise and cloud

    JavaScript 107 12

  4. slurm-examples slurm-examples Public

    examples of using slurm in life sciences workflows using posix file systems and object storage

    Shell 40 14

  5. proxmox-tools proxmox-tools Public

    prox command line interface for proxmox and other tools and customizations

    Python 40 6

  6. wiki wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    Python 38 45

Repositories

Showing 10 of 609 repositories
  • itn-dashboard Public

    ITN Dashboard for data generated from metricminer

    FredHutch/itn-dashboard’s past year of commit activity
    R 0 0 6 0 Updated Mar 9, 2025
  • gig-map-viewer Public

    Interactive viewer of pangenome results generated by gig-map

    FredHutch/gig-map-viewer’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 8, 2025
  • nf-midas Public

    Nextflow workflow running MIDAS for metagenomic analysis

    FredHutch/nf-midas’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Mar 8, 2025
  • divein Public

    DIVEIN is a web service that performs automated maximum likelihood phylogenetic analyses of nucleotide and amino acid sequences.

    FredHutch/divein’s past year of commit activity
    Perl 0 0 0 0 Updated Mar 8, 2025
  • docker-midas Public

    Docker image running MIDAS

    FredHutch/docker-midas’s past year of commit activity
    Dockerfile 1 2 1 1 Updated Mar 7, 2025
  • gimap Public

    Genetic Interaction MAPping for dual target CRISPR screens

    FredHutch/gimap’s past year of commit activity
    HTML 0 CC0-1.0 0 6 2 Updated Mar 7, 2025
  • gig-map Public

    Build a map of genes present across a set of microbial genomes

    FredHutch/gig-map’s past year of commit activity
    Python 14 4 0 0 Updated Mar 7, 2025
  • wdl-unit-tests Public

    Collection of simple WDL's for use in unit testing of WDL-centric software such as PROOF

    FredHutch/wdl-unit-tests’s past year of commit activity
    Python 0 MIT 0 29 7 Updated Mar 6, 2025
  • ichorCurate Public Forked from ajnetzley/ichorCurate
    FredHutch/ichorCurate’s past year of commit activity
    Python 0 1 0 0 Updated Mar 6, 2025
  • rnaseq-de-viewer-marimo Public

    View for RNAseq-based Differential Expression Analysis Results using Marimo

    FredHutch/rnaseq-de-viewer-marimo’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Mar 6, 2025
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