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A React based FlyBase wrapper around Cytoscape for displaying network plots.

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FlyBase Cytoscape

Description

A simple React component for displaying networks using CytoscapeJS.

Getting started

The following clones the Github repo, installs dependencies, and starts a development server with a small demo.

git clone https://github.com/FlyBase/flybase-cytoscape
cd flybase-cytoscape
yarn install
yarn run start

Supported Networks

  • FlyBase Gene Group pathway networks.

Development

Proxy settings

By default, the development environment proxy's API data from the FlyBase preview server at https://preview.flybase.org/. If you wish to change the source of network data you will need to modify the proxy setting in the package.json file located in the top level directory.

Available Scripts

In the project directory, you can run:

npm start

Runs the app in the development mode.
Open http://localhost:3000 to view it in the browser.

The page will reload if you make edits.
You will also see any lint errors in the console.

npm test

Launches the test runner in the interactive watch mode.
See the section about running tests for more information.

npm run build

Builds the app for production to the build folder.
It correctly bundles React in production mode and optimizes the build for the best performance.

The build is minified and the filenames include the hashes.
Your app is ready to be deployed!

See the section about deployment for more information.

npm run eject

Note: this is a one-way operation. Once you eject, you can’t go back!

If you aren’t satisfied with the build tool and configuration choices, you can eject at any time. This command will remove the single build dependency from your project.

Instead, it will copy all the configuration files and the transitive dependencies (Webpack, Babel, ESLint, etc) right into your project so you have full control over them. All of the commands except eject will still work, but they will point to the copied scripts so you can tweak them. At this point you’re on your own.

You don’t have to ever use eject. The curated feature set is suitable for small and middle deployments, and you shouldn’t feel obligated to use this feature. However we understand that this tool wouldn’t be useful if you couldn’t customize it when you are ready for it.

Learn More

You can learn more in the Create React App documentation.

To learn React, check out the React documentation.

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A React based FlyBase wrapper around Cytoscape for displaying network plots.

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