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FlyBase

A Database of Drosophila Genes & Genomes

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  1. drosophila-anatomy-developmental-ontology drosophila-anatomy-developmental-ontology Public

    The home of the Drosophila anatomy ontology

    Jupyter Notebook 19 6

  2. react-sequence-viewer react-sequence-viewer Public

    A React wrapper around the BioJS sequence-viewer component

    JavaScript 8 3

  3. react-ontology-ribbon react-ontology-ribbon Public

    A React component for generating a heatmap type display for GO slims.

    JavaScript 7 4

  4. bulkfile-scripts bulkfile-scripts Public

    Scripts useful for working with bulk FlyBase data locally.

    Perl 3 5

  5. flybase-controlled-vocabulary flybase-controlled-vocabulary Public

    The home of the FlyBase miscellaneous ontologies - incorporating the Drosophila Phenotype Ontology (see also FlyBase/drosophila-phenotype-ontology)

    Shell 10 5

  6. chado chado Public

    Chado related code for FlyBase

    PLpgSQL 1

Repositories

Showing 10 of 51 repositories
  • drosophila-anatomy-developmental-ontology Public

    The home of the Drosophila anatomy ontology

    FlyBase/drosophila-anatomy-developmental-ontology’s past year of commit activity
    Jupyter Notebook 19 CC-BY-4.0 6 15 1 Updated Jan 29, 2025
  • chado Public

    Chado related code for FlyBase

    FlyBase/chado’s past year of commit activity
    PLpgSQL 0 MIT 1 0 0 Updated Jan 29, 2025
  • harvdev-utils Public

    Common Python functions used by FlyBase developers at Harvard.

    FlyBase/harvdev-utils’s past year of commit activity
    Python 2 MIT 0 0 2 Updated Jan 28, 2025
  • flybase-controlled-vocabulary Public

    The home of the FlyBase miscellaneous ontologies - incorporating the Drosophila Phenotype Ontology (see also FlyBase/drosophila-phenotype-ontology)

    FlyBase/flybase-controlled-vocabulary’s past year of commit activity
    Shell 10 CC-BY-4.0 5 0 0 Updated Jan 27, 2025
  • alliance-linkml-flybase Public

    Code for export of FlyBase data to the Alliance LinkML-based persistent store.

    FlyBase/alliance-linkml-flybase’s past year of commit activity
    Python 0 MIT 0 0 1 Updated Jan 24, 2025
  • harvdev-bulk-reports Public

    Generate bulk reports for FlyBase curators, users and collaborators.

    FlyBase/harvdev-bulk-reports’s past year of commit activity
    Perl 0 MIT 0 0 0 Updated Jan 24, 2025
  • fuzzy-onions Public

    Helper scripts for the FlyBase scRNAseq project

    FlyBase/fuzzy-onions’s past year of commit activity
    Python 0 MIT 0 1 0 Updated Jan 21, 2025
  • drosophila-phenotype-ontology Public

    The home of the Drosophila phenotype ontology

    FlyBase/drosophila-phenotype-ontology’s past year of commit activity
    Makefile 5 CC-BY-4.0 1 22 0 Updated Jan 13, 2025
  • flybase-ontology-scripts Public

    Scripts for working with FlyBase ontologies, currently mostly for report generation.

    FlyBase/flybase-ontology-scripts’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Dec 9, 2024
  • drosophila-developmental-ontology Public

    The home of the Drosophila developmental ontology, an ontology of Drosophila melanogaster developmental stages.

    FlyBase/drosophila-developmental-ontology’s past year of commit activity
    Makefile 5 CC-BY-4.0 0 0 0 Updated Dec 4, 2024
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