nanometa_live_env.yml

# The main conda environment for Nanometa Live.
# Installation instructions in readme on github.

name: nanometa_live_env
channels:
  - conda-forge
  - bioconda
channel_priority: strict
dependencies:
  - python >=3.11.0
  - dash >=2.8.1
  - dash-daq >=0.5.0
  - dash-bootstrap-components >=1.3.1
  - plotly >=5.13.0
  - numpy >=1.24.1
  - pandas >=1.5.3
  - pyyaml >=6.0
  - pytest >=7.2.1
  - tqdm >=4.62.3
  - snakemake-minimal >=7.20.0
  - setuptools >=67.6.0
  - pip >=23.0.1
  - blast >=2.13.0
  - biopython >=1.80
  - gzip >=1.10
  - kraken2 >=2.1.2
  - fastp >= 0.23.2
  - ruamel.yaml >=0.17.32
  - ncbi-datasets-cli >= 15.20.0