EnsEMBL - Production Tools

Collection of Python command line scripts for interacting with EnsEMBL Production Web Services & libraries.

System Requirements

• Python 3.7+

Installation

This repository can be installed as a Python package. We recommend to install the latest release tag instead of the default branch.

For example, using pip:

pip install git+https://github.com/Ensembl/ensembl-prodinf-tools.git@<Release Tag>

Usage

Command line tools provided by this package:

datacheck-client

Tool for submitting/retrieving DataChecks to/from EnsEMBL Production DC Service

dbcopy-client

Tool for managing DBCopy Request Jobs

gifts-client

Tool for submitting/retrieving Gifts Jobs to/from EnsEMBL Production Gifts Service

handover-client

Tool for submitting/retrieving Handover Jobs to/from EnsEMBL Production Handover Service

Please refer to Docs folder for each tool detailed usage.