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hive_config.json
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hive_config.json
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{
"VERSION" : 0.01,
"REMARKS" : [
"Colour names and colour scheme names are taken from http://www.graphviz.org/doc/info/colors.html"
],
"Valley" : {
"SubmitWorkersMax" : 50
},
"Meadow" : {
"REMARKS" : {
"HOWTO" : "These parameters are optional. When setting them, move them out of the REMARKS section at the same time",
"BaseTempDirectory" : "Where to create temporary directories for workers. When null or missing, workers will ask File::Spec, which choses $TMPDIR or /tmp",
"RunWorkerPath" : "The path of runWorker.pl . When null or missing, beekeeper will use $EHIVE_ROOT_DIR or its own path. When RunWorkerPath is '', beekeeper assumes runWorker.pl is in $PATH"
},
"CleanupTempDirectoryKilledWorkers" : 0,
"MaxLimboSeconds" : 10,
"MaxRegistrationSeconds" : 30,
"CanSubmitJobArrays" : 1,
"LOCAL" : {
"MaxRegistrationSeconds" : 60,
"TotalRunningWorkersMax" : 2,
"my-quadcore-desktop" : {
"TotalRunningWorkersMax" : 4
},
"your-weak-laptop" : {
"TotalRunningWorkersMax" : 1
}
},
"LSF" : {
"SubmissionOptions" : "",
"TotalRunningWorkersMax" : 2000,
"farm3" : {
"SubmissionOptions" : "",
"TotalRunningWorkersMax" : 5000
},
"EBI" : {
"SubmissionOptions" : "",
"TotalRunningWorkersMax" : 10000
},
"codon" : {
"BacctExtraOptions" : "-f -"
}
},
"SLURM" : {
},
"SGE" : {
"SubmissionOptions" : "",
"TotalRunningWorkersMax" : 2000
},
"HTCondor" : {
"SubmissionOptions" : "",
"TotalRunningWorkersMax" : 500
},
"PBSPro" : {
"SubmissionOptions" : "",
"TotalRunningWorkersMax" : 500
}
},
"Graph" : {
"Pad" : "1.0",
"Node" : {
"Font" : "Times-Roman",
"Colour" : "cyan",
"Details" : { "Font" : "Helvetica" },
"JobStatus" : {
"Colour" : "yellow",
"SEMAPHORED" : { "Colour" : "grey" },
"READY" : { "Colour" : "green" },
"INPROGRESS" : { "Colour" : "yellow" },
"DONE" : { "Colour" : "DeepSkyBlue" },
"FAILED" : { "Colour" : "red" }
},
"AnalysisStatus" : {
"Shape" : "Mrecord",
"EMPTY" : { "Colour" : "white" },
"BLOCKED" : { "Colour" : "grey" },
"LOADING" : { "Colour" : "green" },
"ALL_CLAIMED" : { "Colour" : "grey" },
"SYNCHING" : { "Colour" : "green" },
"READY" : { "Colour" : "green" },
"WORKING" : { "Colour" : "yellow" },
"DONE" : { "Colour" : "DeepSkyBlue" },
"FAILED" : { "Colour" : "red" }
},
"Table" : {
"Shape" : "tab",
"Style" : "filled",
"Colour" : "orange",
"HeaderColour" : "orangered",
"Font" : "Courier",
"FontColour" : "black"
},
"AccuSink" : {
"Shape" : "invhouse",
"Style" : "filled",
"Colour" : "darkgreen",
"Font" : "Courier",
"FontColour" : "white"
},
"Switch" : {
"Shape" : "egg",
"Style" : "filled",
"Colour" : "blueviolet",
"Font" : "Courier",
"FontColour" : "white"
}
},
"Edge" : {
"Font" : "Helvetica",
"Data" : { "Colour" : "blue" },
"Control" : { "Colour" : "red" },
"Semablock" : { "Colour" : "red" },
"Accu" : { "Colour" : "darkgreen" }
},
"Box" : {
"Semaphore" : { "ColourScheme" : "blues9", "ColourOffset" : 1 },
"MainPipeline" : { "ColourScheme" : "pastel19", "ColourOffset" : 3 },
"OtherPipeline" : { "ColourScheme" : "pastel19", "ColourOffset" : 8 }
},
"DisplayStats" : "barchart",
"DisplayJobs" : 0,
"DisplayJobLength" : 64,
"DisplayData" : 0,
"DisplayDBIDs" : 1,
"DisplayColumnLength" : 32,
"DisplayConditionLength": 64,
"DisplayInputIDTemplate": 1,
"DisplayDetails" : 1,
"DisplayStretched" : 0,
"DisplaySemaphoreBoxes" : 1,
"DuplicateTables" : 0
}
}