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Copy only necessary cmake macros to case #526

Copy only necessary cmake macros to case

Copy only necessary cmake macros to case #526

Workflow file for this run

name: cime testing
on:
push:
branches:
- master
paths-ignore:
- 'doc/**'
pull_request:
branches:
- master
paths-ignore:
- 'doc/**'
concurrency:
group: ${{ github.ref }}
cancel-in-progress: true
permissions:
contents: read # to fetch code (actions/checkout)
jobs:
pre-commit:
runs-on: ubuntu-latest
timeout-minutes: 2
steps:
- name: Checkout code
uses: actions/checkout@v2
- name: Set up python
uses: actions/setup-python@v2
with:
python-version: 3.9
# Offical action is deprecated in favor of pre-commit.ci
# Should evaulate switching or just running manually.
# - name: Runs pre-commit action
# # Do not run if using act tooling (https://github.com/nektos/act)
# if: ${{ !env.ACT }}
# uses: pre-commit/action@v2.0.3
- name: Runs pre-commit
run: |
pip install pre-commit
pre-commit run -a
# Check if there has been a change to any file under docker/
get-docker-changes:
runs-on: ubuntu-latest
outputs:
any_changed: ${{ steps.get-changed-files.outputs.any_changed }}
steps:
- name: Checkout code
uses: actions/checkout@v3
with:
fetch-depth: 2
- name: Get changed files
id: get-changed-files
uses: tj-actions/changed-files@v29
with:
files: docker
# Only build container if there has been a change.
build-containers:
runs-on: ubuntu-latest
needs: get-docker-changes
if: ${{ needs.get-docker-changes.outputs.any_changed == 'true' }}
steps:
- name: Checkout code
uses: actions/checkout@v3
- name: Set up QEMU
uses: docker/setup-qemu-action@v2
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v2
- name: Login to DockerHub
uses: docker/login-action@v2
with:
username: ${{ secrets.DOCKERHUB_USERNAME }}
password: ${{ secrets.DOCKERHUB_TOKEN }}
- name: Docker meta
id: meta
uses: docker/metadata-action@v4
with:
images: jasonb87/cime
tags: |
type=raw,value=latest
type=sha,prefix={{ date 'YYYYMMDD' }}_,format=short
- name: Build and push
uses: docker/build-push-action@v3
with:
target: base
context: docker/
push: true
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
cache-from: type=registry,ref=jasonb87/cime:buildcache
cache-to: type=registry,ref=jasonb87/cime:buildcache,mode=max
# Runs unit testing under different python versions.
unit-testing:
runs-on: ubuntu-latest
needs: build-containers
if: ${{ always() && ! cancelled() }}
container: jasonb87/cime:latest
strategy:
matrix:
python-version: ['3.8', '3.9', '3.10']
steps:
- name: Checkout code
uses: actions/checkout@v2
- name: Run tests
shell: bash
env:
INIT: "false"
CIME_MODEL: "cesm"
CIME_DRIVER: "mct"
UPDATE_CIME: "true"
GIT_SHALLOW: "true"
CIME_TEST_PLATFORM: ubuntu-latest
run: |
export INSTALL_PATH="${PWD}"
export CIME_REPO=https://github.com/${{ github.event.pull_request.head.repo.full_name || github.repository }}
export CIME_BRANCH=${GITHUB_HEAD_REF:-${GITHUB_REF##*/}}
mamba install -y python=${{ matrix.python-version }}
source /entrypoint.sh
git config --global --add safe.directory /__w/cime/cime
init_cime
pytest -vvv --machine docker --no-fortran-run CIME/tests/test_unit*
# Run system tests
system-testing:
runs-on: ubuntu-latest
needs: build-containers
if: ${{ always() && ! cancelled() }}
container: jasonb87/cime:latest
strategy:
matrix:
model: ["e3sm", "cesm"]
driver: ["mct", "nuopc"]
exclude:
# exclude nuopc driver when running e3sm tests
- model: "e3sm"
driver: "nuopc"
steps:
- name: Checkout code
uses: actions/checkout@v2
- name: Cache inputdata
uses: actions/cache@v2
with:
path: /storage/inputdata
key: inputdata-2
- name: Run tests
shell: bash
env:
INIT: "false"
CIME_MODEL: ${{ matrix.model }}
CIME_DRIVER: ${{ matrix.driver }}
UPDATE_CIME: "true"
GIT_SHALLOW: "true"
CIME_TEST_PLATFORM: ubuntu-latest
run: |
export INSTALL_PATH="${PWD}/cime"
export CIME_REPO=https://github.com/${{ github.event.pull_request.head.repo.full_name || github.repository }}
export CIME_BRANCH=${GITHUB_HEAD_REF:-${GITHUB_REF##*/}}
source /entrypoint.sh
git config --global --add safe.directory /__w/cime/cime
if [[ "${CIME_MODEL}" == "e3sm" ]]
then
init_e3sm
else
init_cime
fi
source /opt/conda/etc/profile.d/conda.sh
conda activate base
pytest -vvv --machine docker --no-fortran-run --no-teardown CIME/tests/test_sys*
- name: Create testing log archive
if: ${{ failure() }}
shell: bash
run: tar -czvf /testing-logs-${GITHUB_RUN_NUMBER}.tar.gz /storage/cases/
# How to download artifacts:
# https://docs.github.com/en/actions/managing-workflow-runs/downloading-workflow-artifacts
- name: Upload testing logs
if: ${{ failure() }}
uses: actions/upload-artifact@v3
with:
name: testing-logs-${{ github.run_number }}
path: /testing-logs-${{ github.run_number}}.tar.gz
retention-days: 4