update all submodules

ESCOMP · Sep 27, 2024 · b60e761 · b60e761
1 parent 4ee72ee
commit b60e761
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Showing 6 changed files with 7 additions and 7 deletions.
diff --git a/.gitmodules b/.gitmodules
@@ -80,7 +80,7 @@
         url = https://github.com/ESCOMP/MOM_interface
         fxDONOTUSEurl = https://github.com/ESCOMP/MOM_interface
         fxrequired = ToplevelRequired
-        fxtag = mi_240823
+        fxtag = mi_240923
 
 [submodule "cism"]
         path = components/cism
@@ -114,7 +114,7 @@
         path = components/ww3
         url = https://github.com/ESCOMP/WW3_interface
         fxDONOTUSEurl = https://github.com/ESCOMP/WW3_interface
-        fxtag = ww3i_0.0.14
+        fxtag = main_0.0.14
         fxrequired = ToplevelRequired
 
 [submodule "mizuroute"]

diff --git a/cime b/cime
diff --git a/components/clm b/components/clm
diff --git a/components/mom b/components/mom
diff --git a/components/ww3 b/components/ww3
diff --git a/tools/CUPiD b/tools/CUPiD
+0 −1		CIME/Tools/xmlchange
+64 −18		CIME/XML/env_batch.py
+12 −0		CIME/XML/env_workflow.py
+2 −0		CIME/data/config/xml_schemas/config_workflow.xsd
+8 −4		CIME/test_scheduler.py
+2 −1		CIME/tests/test_sys_cime_case.py
+1 −1		CIME/tests/test_sys_create_newcase.py
+9 −8		CIME/utils.py
+0 −3		.gitignore
+1 −1		.gitmodules
+12 −12		README
+2 −2		README.md
+2 −2		README_GITFLEXIMOD.rst
+53 −0		WhatsNewInCTSM5.3.md
+40 −6		bld/CLMBuildNamelist.pm
+8 −8		bld/README
+297 −319		bld/namelist_files/namelist_defaults_ctsm.xml
+1 −1		bld/namelist_files/namelist_defaults_fire_emis.xml
+27 −11		bld/namelist_files/namelist_definition_ctsm.xml
+62 −4		bld/unit_testers/build-namelist_test.pl
+2 −2		cime_config/SystemTests/lvg.py
+2 −2		cime_config/testdefs/ExpectedTestFails.xml
+71 −91		cime_config/testdefs/testlist_clm.xml
+1 −0		cime_config/testdefs/testmods_dirs/clm/ExcessIceStreams/include_user_mods
+1 −2		cime_config/testdefs/testmods_dirs/clm/Fates/user_nl_clm
+1 −1		cime_config/testdefs/testmods_dirs/clm/FatesColdAllVars/user_nl_clm
+2 −0		cime_config/testdefs/testmods_dirs/clm/FatesColdLUH2/user_nl_clm
+3 −0		cime_config/testdefs/testmods_dirs/clm/FatesColdLandUse/shell_commands
+0 −1		cime_config/testdefs/testmods_dirs/clm/FatesColdLandUse/user_nl_clm
+1 −1		cime_config/testdefs/testmods_dirs/clm/Hillslope/user_nl_clm
+1 −0		cime_config/testdefs/testmods_dirs/clm/SNICARFRC/include_user_mods
+1 −1		cime_config/testdefs/testmods_dirs/clm/clm60_monthly_matrixcn_soilCN30/user_nl_clm
+0 −16		cime_config/testdefs/testmods_dirs/clm/collapse_pfts_78_to_16_decStart_f10/README
+0 −2		cime_config/testdefs/testmods_dirs/clm/collapse_pfts_78_to_16_decStart_f10/user_nl_clm
+1 −4		cime_config/testdefs/testmods_dirs/clm/f09_dec1990Start_GU_LULCC/user_nl_clm
+1 −0		cime_config/testdefs/testmods_dirs/clm/nofire/include_user_mods
+0 −1		cime_config/testdefs/testmods_dirs/clm/nofire/shell_commands
+3 −0		cime_config/testdefs/testmods_dirs/clm/nofireemis/shell_commands
+1 −0		cime_config/testdefs/testmods_dirs/clm/o3lombardozzi2015/include_user_mods
+1 −0		cime_config/testdefs/testmods_dirs/clm/pauseResume/include_user_mods
+1 −0		cime_config/testdefs/testmods_dirs/clm/prescribed/include_user_mods
+1 −0		cime_config/testdefs/testmods_dirs/clm/pts/include_user_mods
+1 −1		cime_config/testdefs/testmods_dirs/clm/smallville_dynlakes_monthly/user_nl_clm
+1 −1		cime_config/testdefs/testmods_dirs/clm/smallville_dynurban_monthly/user_nl_clm
+1 −0		cime_config/testdefs/testmods_dirs/clm/waccmx_offline/include_user_mods
+0 −3		cime_config/usermods_dirs/NEON/FATES/defaults/user_nl_clm
+0 −3		cime_config/usermods_dirs/NEON/defaults/user_nl_clm
+1 −1		cime_config/usermods_dirs/PLUMBER2/defaults/user_nl_clm
+1 −1		cime_config/usermods_dirs/_includes/cmip6_glaciers_virtual_antarctica/user_nl_clm
+450 −1		doc/ChangeLog
+3 −0		doc/ChangeSum
+0 −0		doc/README.NUOPC_driver.md
+7 −10		doc/source/tech_note/Glacier/CLM50_Tech_Note_Glacier.rst
+2 −89		doc/source/users_guide/using-clm-tools/building-the-clm-tools.rst
+4 −22		doc/source/users_guide/using-clm-tools/what-are-the-clm-tools.rst
+0 −8		python/ctsm/subset_data.py
+1 −3		python/ctsm/test/test_sys_gen_mksurfdata_namelist.py
+1 −1		python/ctsm/test/test_unit_subset_data.py
+6 −6		python/ctsm/test/testinputs/default_data.cfg
+15 −8		python/ctsm/toolchain/gen_mksurfdata_jobscript_multi.py
+24 −71		python/ctsm/toolchain/gen_mksurfdata_namelist.py
+17 −11		src/biogeochem/FireEmisFactorsMod.F90
+1 −1		src/fates
+2 −1		src/main/clm_initializeMod.F90
+111 −95		src/main/glc2lndMod.F90
+30 −7		src/main/glcBehaviorMod.F90
+19 −1		src/main/lnd2glcMod.F90
+66 −1		src/main/surfrdMod.F90
+1 −1		src/main/test/glcBehavior_test/test_glcBehavior.pf
+56 −13		src/main/test/topo_test/test_topo.pf
+16 −42		src/utils/clmfates_interfaceMod.F90
+0 −45		tools/README
+0 −58		tools/README.testing
+0 −151		tools/mkprocdata_map/README
+0 −25		tools/mkprocdata_map/README.filedescriptions
+0 −202		tools/mkprocdata_map/mkprocdata_map_all
+0 −57		tools/mkprocdata_map/mkprocdata_map_functions.bash
+0 −250		tools/mkprocdata_map/mkprocdata_map_wrap
+0 −1		tools/mkprocdata_map/src/Filepath
+0 −10		tools/mkprocdata_map/src/Makefile
+0 −360		tools/mkprocdata_map/src/Makefile.common
+0 −327		tools/mkprocdata_map/src/Mkdepends
+0 −8		tools/mkprocdata_map/src/Srcfiles
+0 −11		tools/mkprocdata_map/src/constMod.F90
+0 −282		tools/mkprocdata_map/src/fileutils.F90
+0 −78		tools/mkprocdata_map/src/fmain.F90
+0 −289		tools/mkprocdata_map/src/gridmapMod.F90
+0 −525		tools/mkprocdata_map/src/mkprocdata_map.F90
+0 −41		tools/mkprocdata_map/src/nanMod.F90
+0 −164		tools/mkprocdata_map/src/shr_file_mod.F90
+0 −19		tools/mkprocdata_map/src/shr_kind_mod.F90
+29 −8		tools/mksurfdata_esmf/Makefile
+4 −8		tools/mksurfdata_esmf/README.filecopies
+4 −0		tools/mksurfdata_esmf/README.md
+38 −42		tools/mksurfdata_esmf/gen_mksurfdata_namelist.xml
+6 −0		tools/mksurfdata_esmf/src/mkfileMod.F90
+21 −3		tools/mksurfdata_esmf/src/mkglacierregionMod.F90
+12 −2		tools/mksurfdata_esmf/src/mksoiltexMod.F90
+4 −4		tools/site_and_regional/default_data_1850.cfg
+6 −6		tools/site_and_regional/default_data_2000.cfg
+110 −0		.github/workflows/general-ci-tests.yml
+5 −5		.gitmodules
+0 −18		.travis.yml
+1 −1		MOM6
+1 −1		README.md
+11 −0		cime_config/MARBL_scripts/MOM_MARBL_diagnostics.py
+24 −15		cime_config/SystemTests/dimcs.py
+23 −14		cime_config/SystemTests/dimcsl.py
+25 −0		cime_config/buildnml
+5 −5		cime_config/config_archive.xml
+1 −0		cime_config/config_component.xml
+18 −1		cime_config/testdefs/testlist_mom.xml
+233 −0		cime_config/tools/lbe.py
+109 −0		cime_config/tools/plot_lbe.py
+117 −0		cime_config/tools/utils.py
+1 −1		externals/MARBL
+1 −1		externals/stochastic_physics
+66 −15		param_templates/MOM_input.yaml
+33 −11		param_templates/diag_table.yaml
+55 −14		param_templates/json/MOM_input.json
+44 −11		param_templates/json/diag_table.json
+0 −42		standalone/build/build_examples-darwin.sh
+52 −6		standalone/build/build_examples.sh
+1 −1		standalone/build/submit_casper_build
+2 −2		standalone/templates/ncar-gnu.mk
+170 −0		standalone/templates/ubuntu-gnu.mk
+1 −2		.gitignore
+6 −3		.gitmodules
+0 −16		Externals.cfg
+5 −6		README.md
+37 −0		contributors.md
+2 −2		cupid/clear.py
+54 −18		cupid/run.py
+26 −17		cupid/timeseries.py
+38 −1		cupid/util.py
+ −		docs/_static/images/config/config_1.png
+ −		docs/_static/images/config/config_2.png
+ −		docs/_static/images/config/config_3.png
+ −		docs/_static/images/config/config_4.png
+ −		docs/_static/images/config/config_5.png
+3 −2		docs/conf.py
+35 −0		docs/config.md
+2 −0		docs/contributors.rst
+2 −0		docs/index.rst
+4 −1		examples/coupled_model/config.yml
+28 −24		examples/key_metrics/config.yml
+189 −79		examples/nblibrary/atm/nmse_PSL.ipynb
+159 −26		examples/nblibrary/glc/LIWG_SMB_diagnostic.ipynb
+5 −3		examples/nblibrary/glc/utils.py
+1 −0		externals/ADF
+1 −0		externals/mom6-tools
+0 −1		manage_externals