Singularity

Bootstrap: docker
From: maplesond/portcullis:test

%labels
   Maintainer maplesond
   Version 1.2.4

%apprun portcullis
    exec portcullis

%apphelp portcullis
    Portcullis is the main tool in this container.  Use it to analyse and predict splice junctions from RNAseq alignments.  Requires a genome is fasta format and a BAM file as input.


%apprun junctools
    exec junctools

%apphelp junctools
    Junctools is a collection of miscellaneous tools for analysing, manipulating and converting junction files.