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Chec and update file paths
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Spokhim committed Sep 5, 2020
1 parent 78110eb commit 9c8af03
Showing 1 changed file with 12 additions and 19 deletions.
31 changes: 12 additions & 19 deletions Snip Investigation.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -10,11 +10,11 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": 3
"version": "3.7.4-final"
},
"orig_nbformat": 2,
"kernelspec": {
"name": "python_defaultSpec_1596697988384",
"name": "python_defaultSpec_1599316647819",
"display_name": "Python 3.7.4 64-bit ('tvb': venv)"
}
},
Expand All @@ -23,7 +23,7 @@
"cells": [
{
"cell_type": "code",
"execution_count": 2,
"execution_count": 6,
"metadata": {},
"outputs": [],
"source": [
Expand Down Expand Up @@ -54,27 +54,27 @@
},
{
"cell_type": "code",
"execution_count": 36,
"execution_count": 7,
"metadata": {
"tags": []
},
"outputs": [
{
"output_type": "stream",
"name": "stdout",
"text": "do-not-track\\LCycle_G[0.75]_MouseCortex_Tseries_20200805-031253_.csv\n"
"text": "do-not-track\\Old\\5_8_20\\LCycle_G[0.75]_MouseCortex_Tseries_20200805-031253_.csv\n"
}
],
"source": [
"TseriesFile = glob.glob(\"do-not-track/LCycle_G[0.75*Tseries*_.csv\")[1]\n",
"ScorrFile = glob.glob(\"do-not-track/LCycle_G[0.75*SCorr*_.csv\")[1]\n",
"FCMFile = glob.glob(\"do-not-track/LCycle_G[0.75*FCM*_.csv\")[1]\n",
"TseriesFile = glob.glob(\"do-not-track\\\\Old\\\\5_8_20\\\\LCycle_G[0.75*Tseries*_.csv\")[1]\n",
"ScorrFile = glob.glob(\"do-not-track\\\\Old\\\\5_8_20\\\\LCycle_G[0.75*SCorr*_.csv\")[1]\n",
"FCMFile = glob.glob(\"do-not-track\\\\Old\\\\5_8_20\\\\LCycle_G[0.75*FCM*_.csv\")[1]\n",
"print(TseriesFile)"
]
},
{
"cell_type": "code",
"execution_count": 37,
"execution_count": 8,
"metadata": {
"tags": []
},
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},
{
"cell_type": "code",
"execution_count": 46,
"execution_count": 19,
"metadata": {
"tags": []
},
Expand All @@ -195,15 +195,15 @@
},
{
"cell_type": "code",
"execution_count": 47,
"execution_count": 10,
"metadata": {
"tags": []
},
"outputs": [
{
"output_type": "stream",
"name": "stdout",
"text": "1\nSCFC = SpearmanrResult(correlation=0.39001655130012575, pvalue=1.2354801358988211e-49)\nFCFC = SpearmanrResult(correlation=0.6129895629303821, pvalue=5.7513349554580164e-70)\n10\nSCFC = SpearmanrResult(correlation=0.3900971456589239, pvalue=1.175791982143924e-49)\nFCFC = SpearmanrResult(correlation=0.613030062899865, pvalue=5.601068427039144e-70)\n100\nSCFC = SpearmanrResult(correlation=0.3900678437055767, pvalue=1.1971537493180992e-49)\nFCFC = SpearmanrResult(correlation=0.6132501520018289, pvalue=4.850195735306111e-70)\n1000\nSCFC = SpearmanrResult(correlation=0.39038286360334234, pvalue=9.863772978751427e-50)\nFCFC = SpearmanrResult(correlation=0.6144452057653352, pvalue=2.215477685245727e-70)\n10000\nSCFC = SpearmanrResult(correlation=0.3864635172803344, pvalue=1.0813446646225768e-48)\nFCFC = SpearmanrResult(correlation=0.6161577817065863, pvalue=7.165704114663534e-71)\n100000\nSCFC = SpearmanrResult(correlation=0.35912096383650566, pvalue=8.039788142483966e-42)\nFCFC = SpearmanrResult(correlation=0.5921138800646416, pvalue=2.9608885744609305e-64)\n"
"text": "1\nSCFC = SpearmanrResult(correlation=0.39001655130012575, pvalue=1.2354801358988211e-49)\nFCFC = SpearmanrResult(correlation=0.6129895629303821, pvalue=5.7513349554580164e-70)\n10\nSCFC = SpearmanrResult(correlation=0.3900971456589239, pvalue=1.175791982143924e-49)\nFCFC = SpearmanrResult(correlation=0.613030062899865, pvalue=5.601068427039144e-70)\n100\nSCFC = SpearmanrResult(correlation=0.3900678437055767, pvalue=1.1971537493180992e-49)\nFCFC = SpearmanrResult(correlation=0.6132501520018289, pvalue=4.850195735306111e-70)\n1000\nSCFC = SpearmanrResult(correlation=0.39038286360334234, pvalue=9.863772978751427e-50)\nFCFC = SpearmanrResult(correlation=0.6144452057653352, pvalue=2.215477685245727e-70)\n10000\nSCFC = SpearmanrResult(correlation=0.3864635172803344, pvalue=1.0813446646225768e-48)\nFCFC = SpearmanrResult(correlation=0.6161577817065863, pvalue=7.165704114663534e-71)\n100000\nSCFC = SpearmanrResult(correlation=0.35912096383650566, pvalue=8.039788142483966e-42)\nFCFC = SpearmanrResult(correlation=0.5921138800646416, pvalue=2.9608885744609305e-64)\n"
}
],
"source": [
Expand Down Expand Up @@ -275,13 +275,6 @@
"Until we snip 1e5 of data (which is like 5/6 of the data) and the usual, since we are taking the correlation of a shorter data length, our error bars indicate that the result we get is worse. \n",
"This salso uggests, that the snip we have so far already allows the system to reach equilibrium if it ever does. "
]
},
{
"cell_type": "code",
"execution_count": null,
"metadata": {},
"outputs": [],
"source": []
}
]
}

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