Skip to content
@DeplanckeLab

Deplancke's Lab

Popular repositories Loading

  1. BRB-seqTools BRB-seqTools Public

    Suite of tools for processing BRB-seq data

    Java 28 9

  2. ASAP ASAP Public

    ASAP : Automated Single-cell Analysis Pipeline

    Java 26 10

  3. ChromatinHD ChromatinHD Public

    High-definition modeling of chromatin + transcriptomics data

    Python 23

  4. Live-seq Live-seq Public

    Live-seq

    R 8 4

  5. Chromatin_modules Chromatin_modules Public

    Chromatin Modules across cell types.The code

    Jupyter Notebook 4

  6. SSPCI SSPCI Public

    Somatic stem and progenitor cell identification based on single-cell RNA-sequencing data

    R 3

Repositories

Showing 10 of 36 repositories
  • asap_web Public

    ASAP container for hosting the web portal

    HTML 1 GPL-3.0 0 1 0 Updated Apr 16, 2025
  • Neuro_Droso_ND75KD Public

    ND75KD project

    HTML 0 GPL-3.0 0 0 0 Updated Apr 16, 2025
  • ChromatinHD Public

    High-definition modeling of chromatin + transcriptomics data

    Python 23 MIT 0 9 0 Updated Apr 15, 2025
  • CAS-scRNAseq-2025 Public

    CAS-PMO_Ed.5-M3: Single-cell RNA-seq analysis (Lecture + Hands-on)

    HTML 0 GPL-3.0 0 0 0 Updated Apr 11, 2025
  • scfair Public

    an initiative to standardize single-cell genomics data and promote findable, accessible, interoperable, and reusable single-cell data.

    Ruby 0 0 13 0 Updated Apr 9, 2025
  • asap_run Public

    ASAP container for running all pipeline code

    R 0 GPL-3.0 0 2 0 Updated Mar 21, 2025
  • FastReadCounter Public

    Tool for fast counting of reads from BAM file into genomic ranges (GTF, BED, VCF)

    Java 0 GPL-3.0 0 2 0 Updated Feb 21, 2025
  • dgrpool_web Public

    DGRPool is a web application designed to serve as a comprehensive repository for Drosophila Genetic Reference Panel (DGRP) phenotyping datasets.

    Ruby 0 GPL-3.0 0 0 0 Updated Feb 17, 2025
  • EXTRA-seq Public

    Scripts for the EXTRA-seq manuscript

    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Feb 15, 2025
  • Context-TFs Public

    Material and source code for Kribelbauer et al.

    Jupyter Notebook 0 CC0-1.0 1 0 0 Updated Feb 3, 2025
View all repositories

Top languages

Loading…

Most used topics

Loading…