Skip to content
@DataBiosphere

Data Biosphere

We are creating a vibrant ecosystem of interoperable modules and data environments for the biomedical community.

Popular repositories Loading

  1. toil toil Public

    A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

    Python 907 240

  2. dsub dsub Public

    Open-source command-line tool to run batch computing tasks and workflows on backend services such as Google Cloud.

    Python 265 45

  3. terra-ui terra-ui Public

    Web user interface for the Terra platform

    TypeScript 53 21

  4. leonardo leonardo Public

    Notebook service

    Scala 44 21

  5. terra-docker terra-docker Public

    Jupyter Notebook 27 34

  6. job-manager job-manager Public

    Job Manager API and UI for interacting with asynchronous batch jobs and workflows.

    TypeScript 26 5

Repositories

Showing 10 of 160 repositories
  • java-pfb Public
    DataBiosphere/java-pfb’s past year of commit activity
    Java 1 BSD-3-Clause 0 0 1 Updated Jan 20, 2025
  • data-portal Public
    DataBiosphere/data-portal’s past year of commit activity
    TypeScript 10 Apache-2.0 21 25 38 Updated Jan 20, 2025
  • DataBiosphere/terra-workspace-data-service’s past year of commit activity
    Java 4 BSD-3-Clause 0 0 1 Updated Jan 20, 2025
  • DataBiosphere/terra-landing-zone-service’s past year of commit activity
    Java 6 BSD-3-Clause 1 0 3 Updated Jan 20, 2025
  • jade-data-repo Public

    The Terra Data Repository built by the Jade team.

    DataBiosphere/jade-data-repo’s past year of commit activity
    Java 13 BSD-3-Clause 5 0 5 Updated Jan 20, 2025
  • terra-resource-buffer Public

    Terra Resource Buffering Service

    DataBiosphere/terra-resource-buffer’s past year of commit activity
    Java 4 BSD-3-Clause 2 0 1 Updated Jan 20, 2025
  • duos-ui Public

    Broad Institute Data Use Oversight System

    DataBiosphere/duos-ui’s past year of commit activity
    JavaScript 9 BSD-3-Clause 4 0 6 Updated Jan 20, 2025
  • DataBiosphere/terra-workspace-manager’s past year of commit activity
    Java 14 BSD-3-Clause 7 0 6 Updated Jan 20, 2025
  • DataBiosphere/terra-billing-profile-manager’s past year of commit activity
    Java 4 BSD-3-Clause 1 0 5 Updated Jan 20, 2025
  • consent Public

    Broad Institute Data Use Oversight System

    DataBiosphere/consent’s past year of commit activity
    Java 10 BSD-3-Clause 2 0 6 Updated Jan 20, 2025

Top languages

Loading…

Most used topics

Loading…