v1.0.6

1.0.6 - Bug fix release

This release fixes a few bugs, some reported internally, some reported by users.

Bug fixes

• Fix genomic plot concatenations when running under Docker (#32)
• Allow running WisecondorX with size selection (8824631)

Internal changes

• Don't try to be too smart with HMMcopy's ReadCounter (1bbae57)

v1.0.5

1.05 - Bug fix release

This release includes new documentation and a test profile to quickly evaluate SAMURAI using artificial data.

Documentation

• Add usage docs (PR #31, @SaraPotente) (#14)

Internal changes

• Rename test_ascat profile to test
• Fix some nf-core module linting

Full Changelog: v1.0.4...v1.0.5

v1.0.4 - Bug fix release

This is a bug fix release, addressing some bugs found during internal usage, and from initial feedback from external users.

What's Changed

Bug fixes

• Fix generating WisecondorX plots (@lbeltrame) (#28)

Internal changes

• Initial work towards implementation of a test profile (@SaraPotente) (#6)

Full Changelog: v1.0.3...v1.0.4

1.0.3 - Bug fix release

This is a bug fix release, addressing some bugs found during internal usage, and from initial feedback from external users.

What's Changed

Bug fixes

• Fix ichorCNA PoN generation (issue #20) - PR #22
• Fix iGenomes not being automatically downloaded (issue #19)

Full Changelog: v1.0.2...v1.0.3

1.0.2 - Bug fix release

This is a bug fix release, solving an issue that caused the CIN signature workflow to fail.

Bug Fixes

• Fix CIN signature output file detection.

Full Changelog: v1.0.1...v1.0.2

1.0.1 - Bug fix release

This is is a minor release which fixes a subtle but important bug found in the upstream gistic-cli project.

Bug Fixes

• Bump container version for gistic-cli to fix an off-by-one error in upstream gistic-cli.

Full Changelog: v1.0.0...v1.0.1

1.0.0 - Initial SAMURAI release

Initial release.