MAINT: update lock files

.github/workflows/ci.yml

@@ -5,9 +5,6 @@ concurrency:
   cancel-in-progress: |-
     ${{ github.ref != format('refs/heads/{0}', github.event.repository.default_branch) }}
 
-env:
-  PYTHONHASHSEED: "0"
-
 on:
   push:
     branches:
@@ -36,3 +33,8 @@ jobs:
       apt-packages: graphviz
       gh-pages: true
       specific-pip-packages: ${{ inputs.specific-pip-packages }}
+  style:
+    if: inputs.specific-pip-packages == ''
+    secrets:
+      token: ${{ secrets.PAT }}
+    uses: ComPWA/actions/.github/workflows/pre-commit.yml@v2.1

.pre-commit-config.yaml

@@ -1,6 +1,8 @@
 ci:
   autoupdate_commit_msg: "MAINT: update lock files"
   autoupdate_schedule: quarterly
+  skip:
+    - uv-lock
 
 repos:
   - repo: meta
@@ -9,7 +11,7 @@ repos:
       - id: check-useless-excludes
 
   - repo: https://github.com/ComPWA/policy
-    rev: 0.5.5
+    rev: 0.5.15
     hooks:
       - id: check-dev-files
         args:
@@ -23,7 +25,7 @@ repos:
       - id: remove-empty-tags
 
   - repo: https://github.com/kynan/nbstripout
-    rev: 0.7.1
+    rev: 0.8.1
     hooks:
       - id: nbstripout
         args:
@@ -51,7 +53,7 @@ repos:
             metadata.vscode
 
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.7.1
+    rev: v0.9.1
     hooks:
       - id: ruff
         args: [--fix]
@@ -68,7 +70,7 @@ repos:
       - id: trailing-whitespace
 
   - repo: https://github.com/ComPWA/prettier-pre-commit
-    rev: v3.3.3
+    rev: v3.4.2
     hooks:
       - id: prettier
         exclude: >-
@@ -82,7 +84,7 @@ repos:
       - id: taplo-format
 
   - repo: https://github.com/pappasam/toml-sort
-    rev: v0.23.1
+    rev: v0.24.2
     hooks:
       - id: toml-sort
         args:
@@ -100,6 +102,6 @@ repos:
           )$
 
   - repo: https://github.com/astral-sh/uv-pre-commit
-    rev: 0.4.27
+    rev: 0.5.18
     hooks:
       - id: uv-lock

.readthedocs.yml

@@ -12,9 +12,11 @@ build:
       export UV_LINK_MODE=copy
       uv run \
         --group doc \
-        --locked \
         --no-dev \
         --with tox \
         tox -e doc
       mkdir -p $READTHEDOCS_OUTPUT
       mv docs/_build/html $READTHEDOCS_OUTPUT
+
+sphinx:
+  configuration: docs/conf.py

.taplo.toml

@@ -10,3 +10,10 @@ compact_inline_tables = true
 indent_string = "    "
 reorder_arrays = true
 reorder_keys = true
+
+[[rule]]
+include = ["**/pyproject.toml"]
+keys = ["tool.tox"]
+
+[rule.formatting]
+reorder_arrays = false

.vscode/extensions.json

@@ -10,6 +10,7 @@
     "mhutchie.git-graph",
     "ms-python.python",
     "ms-toolsai.jupyter",
+    "ms-toolsai.vscode-jupyter-cell-tags",
     "ms-vscode.live-server",
     "ms-vsliveshare.vsliveshare",
     "redhat.vscode-yaml",
@@ -28,6 +29,7 @@
     "ms-python.isort",
     "ms-python.mypy-type-checker",
     "ms-python.pylint",
+    "ms-toolsai.vscode-jupyter-slideshow",
     "travisillig.vscode-json-stable-stringify",
     "tyriar.sort-lines"
   ]

pyproject.toml

@@ -117,6 +117,7 @@ split-on-trailing-comma = false
     "RUF001",
     "S101",
     "T20",
+    "TC00",
     "TCH",
 ]
 "docs/*" = [
@@ -139,123 +140,119 @@ in_place = true
 sort_first = [
     "build-system",
     "project",
-    "tool.setuptools",
-    "tool.setuptools_scm",
+    "tool.tox.env_run_base",
 ]
 spaces_indent_inline_array = 4
 trailing_comma_inline_array = true
 
 [tool.tox]
-legacy_tox_ini = """
-[tox]
-envlist =
-    cov,
-    docnb-force,
-    linkcheck,
-    sty,
-skip_install = True
-skip_missing_interpreters = True
-skipsdist = True
+env_list = [
+    "cov",
+    "docnb-force",
+    "linkcheck",
+    "sty",
+]
+no_package = true
+requires = ["tox>=4.21.0"]
+skip_install = true
+skip_missing_interpreters = true
 
-[testenv]
-passenv = *
-setenv =
-    PYTHONHASHSEED = 0
+[tool.tox.env_run_base]
+pass_env = ["*"]
 
-[testenv:doc]
-allowlist_externals =
-    sphinx-build
-commands =
-    sphinx-build \
-        --builder=html \
-        --fail-on-warning \
-        --keep-going \
-        --show-traceback \
-        docs/ docs/_build/html
-description = Build documentation and API through Sphinx
-setenv =
-    {[testenv]setenv}
-    PYTHONWARNINGS =
+[tool.tox.env.doc]
+allowlist_externals = ["sphinx-build"]
+commands = [
+    [
+        "sphinx-build",
+        "--builder=html",
+        "--fail-on-warning",
+        "--keep-going",
+        "--show-traceback",
+        "docs/",
+        "docs/_build/html",
+    ],
+]
+description = "Build documentation and API through Sphinx"
+set_env.PYTHONWARNINGS = ""
 
-[testenv:docnb]
-base = doc
-description = {[testenv:doc]description} with cached notebook execution
-passenv = *
-setenv =
-    {[testenv:doc]setenv}
-    EXECUTE_NB = yes
+[tool.tox.env.doclive]
+allowlist_externals = ["sphinx-autobuild"]
+commands = [
+    [
+        "sphinx-autobuild",
+        "--builder=html",
+        "--ignore=docs/_build/",
+        "--ignore=docs/_images/",
+        "--ignore=docs/api/",
+        "--open-browser",
+        "--port=0",
+        "--re-ignore='.*/__pycache__/.*'",
+        "--re-ignore='.*/.ipynb_checkpoints/.*'",
+        "--re-ignore='.*/.virtual_documents/.*'",
+        "--re-ignore='.*\\.csv'",
+        "--re-ignore='.*\\.gif'",
+        "--re-ignore='.*\\.gitignore'",
+        "--re-ignore='.*\\.gv'",
+        "--re-ignore='.*\\.inv'",
+        "--re-ignore='.*\\.json'",
+        "--re-ignore='.*\\.pickle'",
+        "--re-ignore='.*\\.png'",
+        "--re-ignore='.*\\.svg'",
+        "--re-ignore='.*\\.tmp'",
+        "--re-ignore='.*\\.ya?ml'",
+        "--watch=docs",
+        "--watch=src",
+        "docs/",
+        "docs/_build/html",
+    ],
+]
+description = "Set up a server to directly preview changes to the HTML pages"
+set_env.PYTHONWARNINGS = ""
 
-[testenv:docnb-force]
-base = doc
-description = {[testenv:doc]description} with notebook execution (no cache)
-passenv = *
-setenv =
-    {[testenv:doc]setenv}
-    FORCE_EXECUTE_NB = yes
+[tool.tox.env.docnb]
+base = ["tool.tox.env.doc", "tool.tox.env_run_base"]
+description = "{[tool.tox.env.doc]description} with cached notebook execution"
+set_env = [
+    {replace = "ref", of = ["tool.tox.env.doc.set_env"]},
+    {EXECUTE_NB = "yes"},
+]
 
-[testenv:doclive]
-allowlist_externals =
-    sphinx-autobuild
-commands =
-    sphinx-autobuild \
-        --builder=html \
-        --ignore=docs/_build/ \
-        --ignore=docs/_images/ \
-        --ignore=docs/api/ \
-        --open-browser \
-        --port=0 \
-        --re-ignore='.*/__pycache__/.*' \
-        --re-ignore='.*/.ipynb_checkpoints/.*' \
-        --re-ignore='.*/.virtual_documents/.*' \
-        --re-ignore='.*\\.csv' \
-        --re-ignore='.*\\.gif' \
-        --re-ignore='.*\\.gitignore' \
-        --re-ignore='.*\\.gv' \
-        --re-ignore='.*\\.inv' \
-        --re-ignore='.*\\.json' \
-        --re-ignore='.*\\.pickle' \
-        --re-ignore='.*\\.png' \
-        --re-ignore='.*\\.svg' \
-        --re-ignore='.*\\.tmp' \
-        --re-ignore='.*\\.ya?ml' \
-        --watch=docs \
-        --watch=src \
-        docs/ docs/_build/html
-description = Set up a server to directly preview changes to the HTML pages
-setenv =
-    {[testenv:doc]setenv}
+[tool.tox.env.docnb-force]
+base = ["tool.tox.env.doc", "tool.tox.env_run_base"]
+description = "{[tool.tox.env.doc]description} with notebook execution (no cache)"
+set_env = [
+    {replace = "ref", of = ["tool.tox.env.doc.set_env"]},
+    {FORCE_EXECUTE_NB = "yes"},
+]
 
-[testenv:docnblive]
-base = doclive
-description = {[testenv:doclive]description} with cached notebook execution
-passenv = *
-setenv =
-    {[testenv:doclive]setenv}
-    EXECUTE_NB = yes
+[tool.tox.env.docnblive]
+base = ["tool.tox.env.doclive", "tool.tox.env_run_base"]
+description = "{[tool.tox.env.doclive]description} with cached notebook execution"
+set_env = [
+    {replace = "ref", of = ["tool.tox.env.doclive.set_env"]},
+    {EXECUTE_NB = "yes"},
+]
 
-[testenv:linkcheck]
-allowlist_externals =
-    sphinx-build
-commands =
-    sphinx-build \
-        --builder=linkcheck \
-        --show-traceback \
-        docs/ docs/_build/linkcheck
-description = Check external links in the documentation (requires internet connection)
-setenv =
-    {[testenv:doclive]setenv}
+[tool.tox.env.linkcheck]
+allowlist_externals = ["sphinx-build"]
+commands = [
+    [
+        "sphinx-build",
+        "--builder=linkcheck",
+        "--show-traceback",
+        "docs/",
+        "docs/_build/linkcheck",
+    ],
+]
+description = "Check external links in the documentation (requires internet connection)"
 
-[testenv:nb]
-allowlist_externals =
-    pytest
-commands =
-    pytest --nbmake {posargs:docs}
-description = Run all notebooks with pytest
+[tool.tox.env.nb]
+allowlist_externals = ["pytest"]
+commands = [["pytest", "--nbmake", "{posargs:docs}"]]
+description = "Run all notebooks with pytest"
 
-[testenv:sty]
-allowlist_externals =
-    pre-commit
-commands =
-    pre-commit run --all-files {posargs}
-description = Perform all linting, formatting, and spelling checks
-"""
+[tool.tox.env.sty]
+allowlist_externals = ["pre-commit"]
+commands = [["pre-commit", "run", "--all-files", {replace = "posargs", extend = true}]]
+description = "Perform all linting, formatting, and spelling checks"